Gene Lreu_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0513 
Symbol 
ID5188950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp573369 
End bp574226 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content38% 
IMG OID640590320 
Productrod shape-determining protein MreC 
Protein accessionYP_001271118 
Protein GI148543748 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAT TTTTTTCCAA TCGCCGATTA GTTATTGCTG TGATAATTCT AGTTGTCTGT 
TTTGGACTAA TGGCAGGTTC TGTTTCTTTA CGGAATAGGC GAAATACACC ACCGATCATC
CAACAATTTG GAAATGATAT TGTTGGCTTT GTTGATAGTG CAGTTGCTCT CCCTGTAAAT
TGGGCACAGA CAAGTGTGAG TTCAATAAAT GGGTTGATGA ATACTTATTC TGAAAACCGT
GAACTTAAAC AGCAAGTAAC TGAATTAGCA CAAACTAAAG TCCGTGATCA GACCTTAGCT
CATGAAAACA AACAATTAAA ACAACAGTTA AAACTTAATA ATTCAATGAC CGACTATAAT
ACAGTTACAG CGGCTGTGTT AATGCGCACA CCTTCTTCGT GGCAAAGACA ACTCGTGATT
AATAAGGGGC AATCTAGTGG TATTAAGAAG AATATGCCCG TTATGAGTGG TAGTGGGTTA
ATTGGTCGGA TTACAGAAGT AAATAAAACT AATAGCAAAG TTGAATTATT GAGTGATACC
AGTGAATCAT CAAACCGTTT TGCAATTACT CTTAATGGTC AAAATGGGAA GGTGATTAAT
GGGATTATCA CCGGATATAA TGCAAGAAAT AACGAGCTTG AAATGGGACA AGTAACTTCT
AAAGCTAAAA TAAAAAAAGG TACCCGAGTA GTAACCAGTG GAATGGGTGG TGTGACACCT
AAGGGACTTT ATGTTGGCCG CGTGTCACGT GTCGGTAAAG ATGATTATGG TCTCGCCCAG
AAAATCTATA TTACTCCAGC AACGGACTTT AATGATATTA ATATTGTTAC AGTTGCTGAA
GCGGCCTCAC AGGAGTGA
 
Protein sequence
MQKFFSNRRL VIAVIILVVC FGLMAGSVSL RNRRNTPPII QQFGNDIVGF VDSAVALPVN 
WAQTSVSSIN GLMNTYSENR ELKQQVTELA QTKVRDQTLA HENKQLKQQL KLNNSMTDYN
TVTAAVLMRT PSSWQRQLVI NKGQSSGIKK NMPVMSGSGL IGRITEVNKT NSKVELLSDT
SESSNRFAIT LNGQNGKVIN GIITGYNARN NELEMGQVTS KAKIKKGTRV VTSGMGGVTP
KGLYVGRVSR VGKDDYGLAQ KIYITPATDF NDINIVTVAE AASQE