Gene Lreu_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0500 
SymbolrpsD 
ID5189779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp554127 
End bp554732 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content44% 
IMG OID640590307 
Product30S ribosomal protein S4 
Protein accessionYP_001271105 
Protein GI148543735 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000917743 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTT ACACTGGTCC AAGTTGGCGT GTTTCACGTC GTCTTGGCGT TTCACTTTCA 
GGTACTGGTA AAGAATTAGC ACGTCGGGCT TACGCTCCTG GTGACCACGG TCGTGATCGT
CGCGGTAAGC TTTCAGAATA TGGTACACAA TTACGTGAAA AGCAAAAGCT ACGTTTTATG
TACGGTATGA CTGAACGTCA ATTCTCAAAC CTTTTCGTTC GTGCCGGTAA GATTAAGGAA
GGTACTCACG GTGCCAACTT TATGGCATTG CTTGAACGTC GTCTTGATAA CATGGTTTAC
CGTCTTGGTT TAGCCACTAC TCGTCGTCAA GCTCGTCAAT TAGTTAACCA CGGTCACATC
ACTGTTGATG GTAAGCGTGT TGACATTCCA TCATACGAAG TTAAGGTTGG TCAAATCATC
GCCGTTCGTG ACAAGTCTAA GAACTTAGAC ATCATCAAGA ACGCTGTAGA AGCTGTTGTT
TCTCGTCCTT CATACGTTGA CTTTGATGCC GACAAGCTTG AAGGTAAGCT TAACCGCATT
CCAGCACGTG AAGATATGAA CGCTGATATT GATGAAGCTC TTATCGTTGA ATTCTACAAC
AAGTAA
 
Protein sequence
MSRYTGPSWR VSRRLGVSLS GTGKELARRA YAPGDHGRDR RGKLSEYGTQ LREKQKLRFM 
YGMTERQFSN LFVRAGKIKE GTHGANFMAL LERRLDNMVY RLGLATTRRQ ARQLVNHGHI
TVDGKRVDIP SYEVKVGQII AVRDKSKNLD IIKNAVEAVV SRPSYVDFDA DKLEGKLNRI
PAREDMNADI DEALIVEFYN K