Gene Lreu_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0479 
Symbol 
ID5190005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp532927 
End bp534342 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content43% 
IMG OID640590286 
Productsugar transporter 
Protein accessionYP_001271084 
Protein GI148543714 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.49242e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG CCGAGAAGAA AATATCAAGT GCATTTATCT ACTTCTTCGG ATCATTTGGG 
GGCATCCTAT TTGGTTACGA TATCGGTGTT ATGACTGGTG CCTTACCTTT CTTACAAGCT
GATTGGCACC TTGAAAATGC AGCTTCTCTC GTTGGTTGGA TTACTTCAGC AGTTATGTTT
GGGGCAATCT TCGGGGGCGC ATTAGCCGGA CAGCTTTCTG ATAAGTTTGG TCGGCGGAAA
ATGATTTTAA TGTCTGCGAT TGTATTCATG GTATTCTCCG TTTTATCTGG TGTTTCACCA
GACATGGGCG AAGCAAGTGC CTATTATCTG ATTATTGTTC GGATGCTTTT AGGTTTAGCG
GTTGGGGCTG CCTCAGCCTT GGTACCAGCT TATATGTCCG AAATGGCACC AGCTAAAGCG
CGTGGACGTT TATCTGGACT TAACCAAACA ATGATTGTTT CCGGAATGTT ATTGTCATAT
GTTGTTGACT TCCTATTGAA AGACCTTCCT GGTGAATGGG CATGGCGTCT TATGTTAGGA
TTGGCAGCTG TTCCTGCTTT AATCTTATTC CTTGGTGTTC TTCGTTTGCC AGAATCTCCA
CGGTTCTTAT TGCGTAAAGG TGATGAAGCA CAAGCACGGA AAGTTCTTTC TTACATTCGT
AAAAATCCAG CTGAGATTGA CCAAGAATTA GCAAGTATTA AAGAAACTGC TAAAGAAGAG
CGACAAGCAA ATCAAAAGAC AAGTTGGTCA ACCTTATTCA GTGGCAAGTA TCGTTACCTA
GTTATTGCTG GGGTTGGGGT TGCAGCCTTC CAACAATTCC AAGGTGCAAA CGCGATCTTC
TACTACATTC CATTAATTGT TCAAAAAGCA ACTGGCCAAG CTGCATCTTC AAACTTAATG
TGGCCAATTG TTCAAGGGGT TATTTTAGTT GTTGGTTCCC TGGTTTACAT GTGGATTGCT
GATAAATTTA ACCGGCGGAC ATTGTTGATG GTTGGTGGTG CTGTCATGGG ACTTTCTTTC
ATTCTTCCAG CCGTTATTAA TTGGATGATG CCAAATATGA ATCCGATGAC AATTGTTGTG
TTCTTATGTA TCTATGTTGC TTTCTACTCC TTCACATGGG CTCCGTTAAC ATGGGTGCTT
GTTGGTGAAA TCTTCCCACT AGCTATCCGG GGTCGTGCCT CTGGTTTAGC TTCATCATTT
AACTGGATTG GATCATGGTT AGTTGGTCTT ATCTTCCCAA TTATGACGGC AAGTATGCCA
CAAGAAGCTG TTTTTGCGAT CTTCGGAATT ATCTGTATCT TAGGAGTTCT CTTTGTTAAG
ACTTGTGTTC CAGAAACTCG TGGGCACACT CTTGAAGAAA TTGAAGAGCA AGGAACAAAC
CATGGTCGAG TAAAGGCCAG CAATCCTGAA AACTAG
 
Protein sequence
MAKAEKKISS AFIYFFGSFG GILFGYDIGV MTGALPFLQA DWHLENAASL VGWITSAVMF 
GAIFGGALAG QLSDKFGRRK MILMSAIVFM VFSVLSGVSP DMGEASAYYL IIVRMLLGLA
VGAASALVPA YMSEMAPAKA RGRLSGLNQT MIVSGMLLSY VVDFLLKDLP GEWAWRLMLG
LAAVPALILF LGVLRLPESP RFLLRKGDEA QARKVLSYIR KNPAEIDQEL ASIKETAKEE
RQANQKTSWS TLFSGKYRYL VIAGVGVAAF QQFQGANAIF YYIPLIVQKA TGQAASSNLM
WPIVQGVILV VGSLVYMWIA DKFNRRTLLM VGGAVMGLSF ILPAVINWMM PNMNPMTIVV
FLCIYVAFYS FTWAPLTWVL VGEIFPLAIR GRASGLASSF NWIGSWLVGL IFPIMTASMP
QEAVFAIFGI ICILGVLFVK TCVPETRGHT LEEIEEQGTN HGRVKASNPE N