Gene Lreu_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0445 
Symbol 
ID5188997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp498381 
End bp499613 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content40% 
IMG OID640590252 
Productarginine deiminase 
Protein accessionYP_001271050 
Protein GI148543680 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2235] Arginine deiminase 
TIGRFAM ID[TIGR01078] arginine deiminase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000529267 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGTC CAATTCATGT TACATCAGAA ATTGGGAAGC TTAAGACAGT TATGTTGCAT 
CGACCAGGTA AGGAAATCGA AAATGTTTAT CCTGAAATTC TTCACCGGAT GCTTGTAGAT
GATATTCCAT ACTTACCGAT CGCTCAAGAA GAACATGACC TTTTTGCGCA AACATTACGT
GATAACGGCG CAGAAGTCTT GTATCTTGAA GATTTATTAA CAGACGCACT GGCAGATGAT
AATATCAAAG ATGAATTCCT TGAAAAGATC ATCGCTGAAT CTGGTTATGC TGCTGGAGCA
ATCCATGACG GCTTAAAGGA ATTCTTGCTT AGTTTCAGTA CTAAGGATAT GGTTAACAAG
ATTATTGCTG GTGTACGTAA AGATGAAATT AAAACAAAGT ATGCTTCGCT TGCCGAATTA
GCAGAAGATA AGGATTACCC ATTCTATATG GATCCAATGC CAAATGCATA CTTTACGCGT
GACCAACAGG CATGTATCGG GGATGGAATT ACCATTAATC ACATGACCTT TAAGGCACGT
CAACGCGAAT CTCTCTTTAC TGAGTACATC ATTAAGCACA ATAAGCGTTT TGCTGACAAG
GGTGTTGAAG TATGGCGAAA CCGTTATCCT GAAGGCCGGA TTGAAGGTGG AGATGAATTA
GTTCTCAGCG ATCATGTATT AGCAATTGGT ATTTCTCAAC GAACATCTGC AAAGGCTATT
ACAGAATTAG CTGAAAGTCT CTTTGAAAAG TCTGATTACG ATACAGTAAT TGCTATCCAT
ATTCCTCACA ATCACGCAAT GATGCACCTT GATACTGTGT TTACAATGAT TAACTATGAT
CAATTTACAG TTCATCCAGC AATCTTACGT GATGGTGGAC ATGTTGATGC ATACATTATG
CACCCAGGTA ATAATGGTGA AATTTCAATT ACTCATGAAA CAAATCTTAA AGAAATTTTG
AAGAAGGCAC TTGATAAGCC GGAAATTGAT TTAATTCCTA CTGGTGGCGG TGATCCAATT
ATTGCCCCAC GTGAACAGTG GAATGACGGT TCTAACACGC TAGCAATTGC CCCTGGTGTA
GTTGTAACTT ATGATCGGAA CTATGTCTCA AACGATTTGC TGCGTAAGCA TGGCATTCTC
GTTCACGAGG TTCGTTCAAG CGAATTATCA CGGGGTCGTG GTGGCCCACG GTGCATGTCA
TGTCCAATTG TTCGTGAAGA TCTCAAGAAA TAA
 
Protein sequence
MQSPIHVTSE IGKLKTVMLH RPGKEIENVY PEILHRMLVD DIPYLPIAQE EHDLFAQTLR 
DNGAEVLYLE DLLTDALADD NIKDEFLEKI IAESGYAAGA IHDGLKEFLL SFSTKDMVNK
IIAGVRKDEI KTKYASLAEL AEDKDYPFYM DPMPNAYFTR DQQACIGDGI TINHMTFKAR
QRESLFTEYI IKHNKRFADK GVEVWRNRYP EGRIEGGDEL VLSDHVLAIG ISQRTSAKAI
TELAESLFEK SDYDTVIAIH IPHNHAMMHL DTVFTMINYD QFTVHPAILR DGGHVDAYIM
HPGNNGEISI THETNLKEIL KKALDKPEID LIPTGGGDPI IAPREQWNDG SNTLAIAPGV
VVTYDRNYVS NDLLRKHGIL VHEVRSSELS RGRGGPRCMS CPIVREDLKK