| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0425 |
|---|
| Symbol | |
|---|
| ID | 5188926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 478252 |
|---|
| End bp | 479259 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640590231 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001271031 |
|---|
| Protein GI | 148543661 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTA ATTTACGTAA TCGTAGTTTC TTAACTCTTG CAGATTTTAA CACTCGGGAA
ATGGAATACA TGCTTGATCT TGCTGAAGAT TTAAAGAAGG CAAAATATGC TGGTTATGAA
GGCAAGAATC TTAAAGGTAA GAACATTGCT TTAATTTTTG AAAAGAGTTC TACTCGTACT
CGTTGTTCTT TTGAAGTTGG TGCTAAGGAT GAAGGTGCTC ATGTAACTTA CCTTGGCCCA
TCAGGTTCAC ACATCGGTCA CAAGGAATCT GTTAAGGATA CTGCACGAGT TCTTGGTGGA
ATGTTTGATG GTATCGAATA CCGTGGATTC TCACAACGCA ATGTTGAAAT TTTAGCTAAG
TACTCTGGTG TACCAGTTTG GAATGGTTTA ACTGACGAAG ACCACCCAAC ACAAGTACTT
GCTGACTTCT TAACCGCTCA CGAAGTATTG AAGAAGCCTT ACAAGGACAT CAAGTTTGCC
TTTGTAGGTG ACGGTCAAGA CAATGTTTCA AATGCATTGA TGCTTGGTGC CGCTGTAATG
GGGATGGAAT ACCACGTTGT TACTCCTAAG GAATTGGAAC CAACTAAGGA AACTCTAGAT
AAGGCTAATG AAATTGCTGC CAAGACTGGT GCTAAGATTG TTGTTACTAA TGACATCAAA
GAAGGTGTCA AAGGTATGGA CGTAATCTAT GCTGATGTTT GGGTATCAAT GGGTGAATCT
GATGATATGT GGGAAAAGCG GATCAACCTT CTTAAGCCTT ACCAAGTAAC AATGGATGTT
ATGAAGGCTA CTGAAAACCC TAATGTTCTC TTTGAACACT GTCTTCCTGC ATTCCACAAC
CTCGACACTG AAGTTGGTAA GGAAATTGAA AAGAAGTTTG GCTTAAAGGA AATGGAAGTT
ACTGACGAAG TATTCGAAAG TGAACATTCA GTTGTCTTCC GTGAAGCCGA AAACCGGATG
CACACTATCA AGGCTGTAAT GGTTGCAACT TTGGGTGAAC AAAACTAA
|
|---|
| Protein sequence | MAFNLRNRSF LTLADFNTRE MEYMLDLAED LKKAKYAGYE GKNLKGKNIA LIFEKSSTRT
RCSFEVGAKD EGAHVTYLGP SGSHIGHKES VKDTARVLGG MFDGIEYRGF SQRNVEILAK
YSGVPVWNGL TDEDHPTQVL ADFLTAHEVL KKPYKDIKFA FVGDGQDNVS NALMLGAAVM
GMEYHVVTPK ELEPTKETLD KANEIAAKTG AKIVVTNDIK EGVKGMDVIY ADVWVSMGES
DDMWEKRINL LKPYQVTMDV MKATENPNVL FEHCLPAFHN LDTEVGKEIE KKFGLKEMEV
TDEVFESEHS VVFREAENRM HTIKAVMVAT LGEQN
|
|---|
| |