Gene Lreu_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0397 
Symbol 
ID5189688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp451241 
End bp451930 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content41% 
IMG OID640590202 
Producturacil-DNA glycosylase 
Protein accessionYP_001271003 
Protein GI148543633 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.359974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACAAT TAATTCATAA CGACTGGTGG GAAGTTTTAA AGCCCCAGTT TGAAAGTGCG 
TATTATGCGC AATTGCATAA TTTCCTAAAA GAAGAATATA CCCATCAAAC GATCTATCCA 
GAAATGCATC ATATTTTTGA AGCATTTGAA TGGACTCCTT TTAGTAAGGT TAAAGTTGTT 
ATCCTTGGTC AAGATCCTTA TCATGGACCA AACCAAGCTC ATGGGTGTAG TTTTTCAGTA 
CTGCCTGGGG TACCGGTCCC GCCTTCATTA CAGAATATTT ACAAAGAATT GCAAAGTGAT 
TTAGGTTGTA CACCGGTAAA TCACGGCTAT TTGAAGAAAT GGGCTGATCA AGGTGTCCTG 
TTGTTAAATT CGGTTTTGAC AGTACGAGCA GGGCAAGCAT ATTCTCACCG TGGACATGGC 
TGGGAGCAAT TAACAGATGC GGCGATTCAT GCTTTATCTG AACGTCCTAA ACCAGTGGTG 
TTCATCTTGT GGGGACGAGC TGCTCGAAAT AAGAAACAGT TAATTAATAC GAAGACAAAT 
ATCGTTCTTG AATCAGCTCA CCCGAGTCCA TTATCTGCTA ACCGTGGATT CTTTGGTTCT 
CGACCATTTT CTAAAACAAA CGAAGCACTT CAGGCAATGG GAGAACAGCC AATTGATTGG 
CAACTGCCTG CCGAACCAAA TTATCGTTAA
 
Protein sequence
MKQLIHNDWW EVLKPQFESA YYAQLHNFLK EEYTHQTIYP EMHHIFEAFE WTPFSKVKVV 
ILGQDPYHGP NQAHGCSFSV LPGVPVPPSL QNIYKELQSD LGCTPVNHGY LKKWADQGVL 
LLNSVLTVRA GQAYSHRGHG WEQLTDAAIH ALSERPKPVV FILWGRAARN KKQLINTKTN 
IVLESAHPSP LSANRGFFGS RPFSKTNEAL QAMGEQPIDW QLPAEPNYR