Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0384 |
Symbol | |
ID | 5189420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 434054 |
End bp | 436918 |
Gene Length | 2865 bp |
Protein Length | 954 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640590189 |
Product | excinuclease ABC subunit A |
Protein accession | YP_001270990 |
Protein GI | 148543620 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000942847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAATG ATAAGATCAT AATTCATGGG GCACGGGCTC ATAACCTAAA AAACATTGAT ATTACTATTC CGAAAAACAA GTTAGTCGTT GTAACTGGTC TGTCGGGTTC TGGAAAGAGT TCTTTAGCTT TTGATACATT ATACGCAGAG GGACAACGAC GCTACGTGGA AAGCTTATCG GCTTATGCGC GGCAATTTTT AGGCCAGATG GATAAGCCAG ATGTAGATTC AATTGACGGG TTATCTCCAG CAATTTCAAT TGACCAAAAA ACAACATCCC ATAATCCGCG TTCAACGGTC GGAACCGTGA CTGAAATTAA CGATTTTCTC CGCTTGCTAT GGGCACGGGT TGGTACACCA ATTTGTCCGA ACGATAATAT TCCAATTACT AGTCAGTCAC CAGAACAAAT GGTGGATCGG GTACTAGAGT TGCCTGAACG GACACGCCTG CAAATTCTTT CACCAGTTGT TCGCGATAAA AAGGGAACAC AAAAGAAAGT CTTTGAGACA ATTAAGCGTG AAGGATTTGT CCGGGTTCAA GTAGATGGCG AAACTTATGA CCTTGATTCA GTCCCTGAAC TAGATAAAAA TAAAAAACAT ACAGTTAATG TCGTGATTGA TCGAATTATC ATCAAAGAGG GAATTAGGTC GCGGCTATTT GACTCCTTTG AATCGGCTCT CCGCTTAAGC GATGGTTATG CAATTGCTGA TGTGATTGGG GGAGACCCAA TTCCATTTTC TGAACAATAT GCTTGTCCAA TTTGTGGCTT TACAGTTGGT GAATTAGAGC CACGGTTATT TTCCTTTAAT GCTCCTACTG GTGCTTGTCC AGAATGTGAA GGGTTAGGAT TGAAGCTCGA AGTAGATATT GATTTAGTAG TTCCTGACCA AACAAAGACC TTAAAAGAAG GGGCAATTGT TCCCTGGAAT CCAATCTCAT CGCAATACTA TCCACAAATG TTGGAACAAT TCTGCAAGTC GGTTGGTATT GATATGGATA CGCCGTTCAA TAAGTTGTCT AAAAAGCAAC AACAACAGAT TTTGTACGGT AATGGTGAAA TACCATTCCA CTTCCATTAT GAGAATGACT TTGGGGGCAT TCGGGATGTC GATGTGCCAT TTGAAGGTGT TATCAATAAT ATTAGCCGAC GTTACCGGGA GACTAACTCA GATTTTACAA GAGAACAAAT GAGAAAATAT ATGACTGAGC TTCCGTGTCC GGTTTGTCAT GGTTATCGGC TAAACCAGCG GGCCTTAGCA GTAAAGATTG ATGGGCGAAA TATCGGTGAA GTTTCCGCTT TATCAATTAG CGATTCTCTT GAATTCTTCA AGAACATTAA ACTTTCTGCA CAAAAAAATG AAATTGCTAA GCCGATTTTA AAAGAAATCA TTGATCGATT AACCTTTATG AAAAATGTTG GTGTTGAATA CCTAACTTTA AGTCGTTCAG CCCGAACTCT TTCAGGGGGA GAAGCTCAGC GGATTCGGTT AGCAACCCAA ATTGGTTCTA ATTTATCAGG AGTAATGTAT GTTCTTGATG AGCCGTCAAT TGGACTTCAT CAACGAGATA ATGACCGTTT GATTGAATCG TTAAAGGCCA TGCGCGATCT CGGCAATACG CTGATTGTCG TAGAGCATGA TGAAGATACA ATGCGCGCGG CTGATTACAT TGTCGATATT GGCCCTGGAG CTGGTGAAAA CGGAGGCCAA GTGATGGCTG CCGGAACTCC TAAGCAAGTT ATGCGATCAC GGAAGTCGTT AACTGGCCAA TACTTATCAG GAAAGAAATT TATTCCGGTT CCTCAAGAGC GCAGAATAGG TAACGGTAAG AAAATTACTA TTACAGGAGC CGCAGAAAAT AACTTAAAGG ATATTACAGT TGATTTTCCG CTTGGTGAGT TTATTTGCGT AACGGGTGTT TCTGGTTCAG GAAAGTCAAC TCTTGTTAAT ATGATCCTCA AAAGGGTTTT GGCACAAAAA CTGAATAATA ATTCAGCAAA GCCTGGCAAG TACAAGTCGA TTAGTGGAGT TGAAAATATT GAGAAAGTTA TTAATATTGA TCAATCGCCA ATTGGTCGTA CTCCACGAAG CAACCCTGCA ACTTATACGG GAGTCTTTGA TGACATTCGT GAATTATTTG CCCAAACCAA CCAAGCTAAA ATGCGTGGGT ATACTAAGGG GCGTTTTAGC TTTAACGTTA AGGGTGGGCG CTGTGAAGCC TGCCGTGGAG ACGGAATTAT TAAAATCGAG ATGAACTTCT TGCCAGATGT TTATGTGCCA TGTGAAGTTT GTCATGGAAC ACGTTATAAT TCTGAAACGC TTGAAGTGGA ATACAAAGGC AAGAATATTG CTGAGGTTCT TAATATGACT GTTTCGGAAG CCCTGGACTT CTTTAGCGCA ATCCCTAAAA TTAAACGTAA ATTGCAAACC ATTGAAGATG TTGGGCTTGG CTATGTTCAC CTTGGTCAAC CAGCAACTAC TCTTTCAGGT GGGGAAGCTC AACGAATGAA ATTAGCAGCT GAACTTCACC GTCAGTCTCA CGGTAAGAGC TTCTATATTT TAGATGAGCC AACTACTGGA TTGCACATGG ATGATATCAA ACGCTTATTA GCTGTCCTGC AGCGGTTAGT CGATGCGGGA AATACTGTTT TAGTAATTGA GCATGATTTA GATGTTGTAA AATCAGCGGA CTGGTTAATT GACCTTGGCC CTGAAGGAGG AGCTGGTGGA GGTAATGTTG TCGCCACTGG AACGCCAGAG CAAGTAGCGG AAGTAAAGGG AAGCTATACT GGTAAATATT TAAAAGAGAT GCTCGAACGA GATCAAAAGT GGGCAGAAGA ACGAGAAGCT AAGCAAAAAA AGTAG
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Protein sequence | MANDKIIIHG ARAHNLKNID ITIPKNKLVV VTGLSGSGKS SLAFDTLYAE GQRRYVESLS AYARQFLGQM DKPDVDSIDG LSPAISIDQK TTSHNPRSTV GTVTEINDFL RLLWARVGTP ICPNDNIPIT SQSPEQMVDR VLELPERTRL QILSPVVRDK KGTQKKVFET IKREGFVRVQ VDGETYDLDS VPELDKNKKH TVNVVIDRII IKEGIRSRLF DSFESALRLS DGYAIADVIG GDPIPFSEQY ACPICGFTVG ELEPRLFSFN APTGACPECE GLGLKLEVDI DLVVPDQTKT LKEGAIVPWN PISSQYYPQM LEQFCKSVGI DMDTPFNKLS KKQQQQILYG NGEIPFHFHY ENDFGGIRDV DVPFEGVINN ISRRYRETNS DFTREQMRKY MTELPCPVCH GYRLNQRALA VKIDGRNIGE VSALSISDSL EFFKNIKLSA QKNEIAKPIL KEIIDRLTFM KNVGVEYLTL SRSARTLSGG EAQRIRLATQ IGSNLSGVMY VLDEPSIGLH QRDNDRLIES LKAMRDLGNT LIVVEHDEDT MRAADYIVDI GPGAGENGGQ VMAAGTPKQV MRSRKSLTGQ YLSGKKFIPV PQERRIGNGK KITITGAAEN NLKDITVDFP LGEFICVTGV SGSGKSTLVN MILKRVLAQK LNNNSAKPGK YKSISGVENI EKVINIDQSP IGRTPRSNPA TYTGVFDDIR ELFAQTNQAK MRGYTKGRFS FNVKGGRCEA CRGDGIIKIE MNFLPDVYVP CEVCHGTRYN SETLEVEYKG KNIAEVLNMT VSEALDFFSA IPKIKRKLQT IEDVGLGYVH LGQPATTLSG GEAQRMKLAA ELHRQSHGKS FYILDEPTTG LHMDDIKRLL AVLQRLVDAG NTVLVIEHDL DVVKSADWLI DLGPEGGAGG GNVVATGTPE QVAEVKGSYT GKYLKEMLER DQKWAEEREA KQKK
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