Gene Lreu_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0357 
Symbol 
ID5189451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp405794 
End bp407632 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content40% 
IMG OID640590162 
Productamino acid permease-associated region 
Protein accessionYP_001270963 
Protein GI148543593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000770343 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCGCT ATTTAAAACG TGTTTTAATC GGGAAACCGT TAAAAACCCT TGATGAAGGG 
CAAACACACT TAACTAAATT TAAAGCATTA GCCATGCTTT CTTCTGACGC AATATCGTCA
GTAGCATATG GACCAGAGCA AATTACAACT GTTCTGGTAA CTTTATCTGC AGCAGCAATC
TGGTATTCAA TTCCGATTGC GGCAGTTGTG TTGGTCCTTT TGTTAGCTAT CACGTTATCA
TACCAACAAA TCATTCATGC CTATCCTAGT GGTGGTGGTG CTTATGTCGT TGCCACACGG
AATTGGGGGA GTAATGGAGG ATTATTTGCT GGAGGATCAT TACTAGTTGA CTATATGTTA
ACGGTGGCCG TTTCAACGAC ATCTGGAGTT GAAGCGATTA CTTCGGCAGT TCCTGCTTTA
TATAAATTTT CAATTCCAAT CGGGATCGTT ATCGTCCTTT TAATCATGTT TATGAATTTA
CGGGGAATGA GTGAAAGTGC AAACTTCCTC ACAATTCCGG TATATTTCTT TGTTATTATG
ATGATTGTGA TGGTAGTATG GGGTGGTTAT AATATTGCCA CTGGTCATAT TCATTACCGG
GCAATTGTCG ATTATGGAAC ACCGGTATCG GGAATGTCAT TTGTTTTGCT TATTCGGGCA
TTCTCGGCTG GTTCATCATC CTTAACTGGG GTAGAAGCCG TAAGTAATGC TGTTCCTAAC
TTTAATAAGC CTAAAGAAAA GAATGCATCA ACTACCCTGG CAATTATGAG TGCTATTTTA
GCGTTCTTCT TTATTGCCGT TATCTTCTTT AGCTTTTATC TGGGGGTAGT TCCTAATTCA
CGGACAACAA TTCTCTCCCA AATGGCCGCG CAAATCTTTG GTGGACATGG GCTAGGTTTT
TACTTGTTGC AACTTTCAAC TGCAATGATT TTAGCAGTTG CTGCTAATAC TGGTTTCTCA
GCCTTTCCAA TTCTTGCCTT TAATATGGCC AAAGATAAAT ATATGCCACA CGCATTCATG
GATCGTGGTG ATCGGTTAGG CTACTCTAAC GGAATTATTT CCTTGGCGAT TGGAGCAATT
ATTTTGATCT TGATCTTCCA CGGTCAGACT AATATGTTAA TTCCACTTTA TGCGGTGGGG
GTATTTGTTC CATTTACTTT ATCGCAATCT GGGATGATTA TTCACTGGTT TAGAGAACGG
GAAGGTTTTT GGTTAGGAAA AGCCTTTATT AACCTAGTAG GAGCCTTGAT TTCATTTGTT
CTTGTTATTT GTTTGTTCTG GCAACACTTT GCAAATGTTT GGCCATACTT AATTATCATG
CCGCTGCTTT TATGGATGTT CCATTCGATT CACCGGCACT ATGTAAAAGT AGCCGCTCAA
TTGCGGGTTG CTGAAAAGAC GAAAGTCCAA TTACATGATT ACGATGGCGC AACGGTGATT
GTTTTAGTTG GTAATGTAAC CCGAGTAACT CGTGGTGCAA TTAATTACGC TCGGTCGATT
GGTGATTATG TTATTGCCAT GCATGTTTCG TTTGATGAAA ACCCAGGCAA AGAGCATAAA
ACAGCAAATG AATTTAAAGC TGAATATCCA GACGTCCGTT TTGTTGATAT TCACTCTTCG
TACCGTTCAA TCGCTAAACC AACATTACGT TTCGTTGATG TGATTGCCAA GCGGGCAGAA
GCAAGAAATT ATTCGACGAC TGTTCTTGTT CCGCAATTTA TTCCTAAGCA TCCATGGCAA
TTGGCCTTGC ATAATCAGAC CAGTGTTCGT TTACGGGCGT TATTGAATTC CCGAGAGAAC
ATTATTGTTG CTAGTTATAA CTACCACCTT CAAGAATAG
 
Protein sequence
MWRYLKRVLI GKPLKTLDEG QTHLTKFKAL AMLSSDAISS VAYGPEQITT VLVTLSAAAI 
WYSIPIAAVV LVLLLAITLS YQQIIHAYPS GGGAYVVATR NWGSNGGLFA GGSLLVDYML
TVAVSTTSGV EAITSAVPAL YKFSIPIGIV IVLLIMFMNL RGMSESANFL TIPVYFFVIM
MIVMVVWGGY NIATGHIHYR AIVDYGTPVS GMSFVLLIRA FSAGSSSLTG VEAVSNAVPN
FNKPKEKNAS TTLAIMSAIL AFFFIAVIFF SFYLGVVPNS RTTILSQMAA QIFGGHGLGF
YLLQLSTAMI LAVAANTGFS AFPILAFNMA KDKYMPHAFM DRGDRLGYSN GIISLAIGAI
ILILIFHGQT NMLIPLYAVG VFVPFTLSQS GMIIHWFRER EGFWLGKAFI NLVGALISFV
LVICLFWQHF ANVWPYLIIM PLLLWMFHSI HRHYVKVAAQ LRVAEKTKVQ LHDYDGATVI
VLVGNVTRVT RGAINYARSI GDYVIAMHVS FDENPGKEHK TANEFKAEYP DVRFVDIHSS
YRSIAKPTLR FVDVIAKRAE ARNYSTTVLV PQFIPKHPWQ LALHNQTSVR LRALLNSREN
IIVASYNYHL QE