Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0352 |
Symbol | |
ID | 5189775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 400552 |
End bp | 401196 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640590157 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_001270958 |
Protein GI | 148543588 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0213465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATA AAAAGATTCC ACGCGCGACT GCGAAACGGT TGCCAATATA TTTCCGTTAT TTAAATGTAT TGAAAGACGC AAATAAGCAA CGGGTATCAT CAACTGAACT TTCGGAGGCT GTGCAAGTTG ATTCGGCAAC GATTCGTCGT GACTTTTCAT ATTTTGGTGA ATTAGGTAAG CGGGGATACG GTTATGACGT TGAAAGTCTA TTAAAGTTTT TTAAAGGAAT CTTACACCAA GACTCATTAG TTAGTGTTGC CTTAGTCGGG GTTGGTAGTT TGGGAAGTGC CTTGTTAAAC TTTAACTTCC ACCAAGATAC TAATTTACGG ATCAGTGCGG CATTTGATAC TAAGCCAGAA TATGCTAATA CAGTCAAAAG TGGTATTCCA ATTTACCCAT CCGAGGATAT GGTAAAGCAG TTAAAAGAGC AACAAATTGA TGTTGTTATT CTAACCGTTC CAGGAATCAA GGCCCAACAC GTTGCGGACC AATTAGTTGA AGCTGGTGTA AAGGGAATTC TTAACTTTAC TCCTGTTCGT TTATCTGTGC CCAAAAATGT TCAAGTTCAA AATATTGACT TAACAAACGA ACTTCAAACA TTAATTTACT TCATTAAAAA TTATACTGAA GATTCAATTA AATAA
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Protein sequence | MANKKIPRAT AKRLPIYFRY LNVLKDANKQ RVSSTELSEA VQVDSATIRR DFSYFGELGK RGYGYDVESL LKFFKGILHQ DSLVSVALVG VGSLGSALLN FNFHQDTNLR ISAAFDTKPE YANTVKSGIP IYPSEDMVKQ LKEQQIDVVI LTVPGIKAQH VADQLVEAGV KGILNFTPVR LSVPKNVQVQ NIDLTNELQT LIYFIKNYTE DSIK
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