Gene Lreu_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0352 
Symbol 
ID5189775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp400552 
End bp401196 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content37% 
IMG OID640590157 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001270958 
Protein GI148543588 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0213465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATA AAAAGATTCC ACGCGCGACT GCGAAACGGT TGCCAATATA TTTCCGTTAT 
TTAAATGTAT TGAAAGACGC AAATAAGCAA CGGGTATCAT CAACTGAACT TTCGGAGGCT
GTGCAAGTTG ATTCGGCAAC GATTCGTCGT GACTTTTCAT ATTTTGGTGA ATTAGGTAAG
CGGGGATACG GTTATGACGT TGAAAGTCTA TTAAAGTTTT TTAAAGGAAT CTTACACCAA
GACTCATTAG TTAGTGTTGC CTTAGTCGGG GTTGGTAGTT TGGGAAGTGC CTTGTTAAAC
TTTAACTTCC ACCAAGATAC TAATTTACGG ATCAGTGCGG CATTTGATAC TAAGCCAGAA
TATGCTAATA CAGTCAAAAG TGGTATTCCA ATTTACCCAT CCGAGGATAT GGTAAAGCAG
TTAAAAGAGC AACAAATTGA TGTTGTTATT CTAACCGTTC CAGGAATCAA GGCCCAACAC
GTTGCGGACC AATTAGTTGA AGCTGGTGTA AAGGGAATTC TTAACTTTAC TCCTGTTCGT
TTATCTGTGC CCAAAAATGT TCAAGTTCAA AATATTGACT TAACAAACGA ACTTCAAACA
TTAATTTACT TCATTAAAAA TTATACTGAA GATTCAATTA AATAA
 
Protein sequence
MANKKIPRAT AKRLPIYFRY LNVLKDANKQ RVSSTELSEA VQVDSATIRR DFSYFGELGK 
RGYGYDVESL LKFFKGILHQ DSLVSVALVG VGSLGSALLN FNFHQDTNLR ISAAFDTKPE
YANTVKSGIP IYPSEDMVKQ LKEQQIDVVI LTVPGIKAQH VADQLVEAGV KGILNFTPVR
LSVPKNVQVQ NIDLTNELQT LIYFIKNYTE DSIK