Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0351 |
Symbol | |
ID | 5188585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 398374 |
End bp | 400311 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590156 |
Product | ABC transporter related |
Protein accession | YP_001270957 |
Protein GI | 148543587 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACTTT TACAGACAAA TGACGTTGTG CGTCGATTTG GCGCGGACGT TTTATTTCAC AATATGAACA TGCAAATTCA AGAGCATGGC CGTACTGCGC TTGTTGGGCG TAATGGTGCT GGTAAAACGA CCTTGTTAAA AATGATCGCT GGAATCACCG AACCAGATGA AGGAACAATT ACGAAGGTTA AAGATTTGAC AATTGGTTAC TTGGCCCAGG ATCAAGGACT CGATAGTCAA AATAGCATTT GGACTGAACT AGATACTGTT TTTGCTCCTC TCCACAAAAT GGAAACGCAA ATCCATGATC TTGAACAGCA ACTAGCTGAC CTTGATAGTT CCGAGAGCAA TTATCAACAA ATTCTTTCAA CATACGATAA TTTACAAACT GCCTTTAAGA AACGGGGTGG TTTCGAATAC GAATCACGTA TGCGGGGAAT TCTACATGGA TTTGGTTTTG GCGAAGATAG TTATGATACG CCAATTAATT CCCTTTCAGG AGGGCAAAAA ACTAAACTCG CCTTAGCAAA GATCCTTCTG CAAGCACCGG GGCTTTTGAT TCTAGATGAA CCGACTAACC ACCTCGACAT GAACGTTCTT TCATGGTTAG AAGATTATCT TAAAAGTTAT CAAGGTGCAT TGCTTATCGT CTCTCACGAC CGTTACTTCT TAGATCGTGT TGTCAGCGAT GTTTATGATC TCGATAATAA AACACTCACC CACTATACTG GTAACTACAC GCAATTTGTT AAACACAAGC AAGAACGATT ACAGGCAGAG TGGAAACACT ATGACCAACA ACAAAAAAAG ATTGCTAAGT TAGAAGACTT TGTTAATCGA AATATTGTTC GTGCCTCAAC GACCAAACGT GCCCAGGCGC GGCGAAAGCA ATTAGAAAAA ATGGAGCGGC TTGAGCGTCC AGAAACTGAT GATAAATCAA TCCATTTCCA ATTCCATTCT GAAAAAGATA GTGGAAATGA AGTTCTTGAT GTGGAGCAGG CAAAAGTTGG CTACGATGAA CAGATCCTTG CTGGGCCGCT TTCATTTAAT GTTCGCAAGC CGCAGCGTGT TGGGATTATC GGACCAAATG GAATCGGAAA ATCAACTTTA CTTAAATCTA TTCTCCATAA AATTCCGTTA ATTAGTGGAA CAATCAAACT CGGTGCTAAC CTCGATATCG GTTACTATGA CCAGGAACAA CAACAATTGC ACCCAAATAA AACCGTTTTA GAAGAAGTAT GGGATGACCA TCCAGAAGTA CCTGAAAAAG ATATTCGCTC ATTATTAGGT AGTTTCTTAT TCGTTGGTGA TGATGTTTAT AAAGTCGTTC ATGACCTATC TGGTGGTGAA AAGGCACGAT TGGAGTTAAC TAAACTCTCA TTTAAACCGA TTAATTTTCT TATCCTTGAT GAACCGACTA ACCACTTAGA TATCGATAGT CGAGAAGTGC TCGAAAACGC AATTAACGAA TTTAGCGGAA CCGTTCTCTT TATTTCTCAC GACCGTTACT TTATTAATCA GGTTGCAACC GATATCCTAG CAATGGAACA TGATGGAATT AAACATTATG AAGGCAATTA TGATGACTAT CTAGTTGCTA AGGAAAAAGA AAGTTCACCT AAAGCTACTT CGCATAATTC CAACACGATC GCTAAAGCAC CAGCTGGTAA GCAATCTTAT CAGCAGAGTA AAGAACAACA GCGTGCTCGC CGAAAAATTC AGCGACAAGT CGATGAACTA GAACAACAGA TGACGGAATT AGAAGAAAAG CAAACTGCAA TTCAAGAACA AATGAGCCAA CCAGAAATCG CTACGGATAT TGGAAAATTA ACCGATCTCC AAAAAGAACT TGATGAATTA TCAGCTAAAT CCGAAGAGGT CGAACTTGCA TGGACAGAAG CAGCAGAAAA ACTGGAAGAA TTTGATCAAG AAAACTAG
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Protein sequence | MLLLQTNDVV RRFGADVLFH NMNMQIQEHG RTALVGRNGA GKTTLLKMIA GITEPDEGTI TKVKDLTIGY LAQDQGLDSQ NSIWTELDTV FAPLHKMETQ IHDLEQQLAD LDSSESNYQQ ILSTYDNLQT AFKKRGGFEY ESRMRGILHG FGFGEDSYDT PINSLSGGQK TKLALAKILL QAPGLLILDE PTNHLDMNVL SWLEDYLKSY QGALLIVSHD RYFLDRVVSD VYDLDNKTLT HYTGNYTQFV KHKQERLQAE WKHYDQQQKK IAKLEDFVNR NIVRASTTKR AQARRKQLEK MERLERPETD DKSIHFQFHS EKDSGNEVLD VEQAKVGYDE QILAGPLSFN VRKPQRVGII GPNGIGKSTL LKSILHKIPL ISGTIKLGAN LDIGYYDQEQ QQLHPNKTVL EEVWDDHPEV PEKDIRSLLG SFLFVGDDVY KVVHDLSGGE KARLELTKLS FKPINFLILD EPTNHLDIDS REVLENAINE FSGTVLFISH DRYFINQVAT DILAMEHDGI KHYEGNYDDY LVAKEKESSP KATSHNSNTI AKAPAGKQSY QQSKEQQRAR RKIQRQVDEL EQQMTELEEK QTAIQEQMSQ PEIATDIGKL TDLQKELDEL SAKSEEVELA WTEAAEKLEE FDQEN
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