Gene Lreu_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0351 
Symbol 
ID5188585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp398374 
End bp400311 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content40% 
IMG OID640590156 
ProductABC transporter related 
Protein accessionYP_001270957 
Protein GI148543587 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTTT TACAGACAAA TGACGTTGTG CGTCGATTTG GCGCGGACGT TTTATTTCAC 
AATATGAACA TGCAAATTCA AGAGCATGGC CGTACTGCGC TTGTTGGGCG TAATGGTGCT
GGTAAAACGA CCTTGTTAAA AATGATCGCT GGAATCACCG AACCAGATGA AGGAACAATT
ACGAAGGTTA AAGATTTGAC AATTGGTTAC TTGGCCCAGG ATCAAGGACT CGATAGTCAA
AATAGCATTT GGACTGAACT AGATACTGTT TTTGCTCCTC TCCACAAAAT GGAAACGCAA
ATCCATGATC TTGAACAGCA ACTAGCTGAC CTTGATAGTT CCGAGAGCAA TTATCAACAA
ATTCTTTCAA CATACGATAA TTTACAAACT GCCTTTAAGA AACGGGGTGG TTTCGAATAC
GAATCACGTA TGCGGGGAAT TCTACATGGA TTTGGTTTTG GCGAAGATAG TTATGATACG
CCAATTAATT CCCTTTCAGG AGGGCAAAAA ACTAAACTCG CCTTAGCAAA GATCCTTCTG
CAAGCACCGG GGCTTTTGAT TCTAGATGAA CCGACTAACC ACCTCGACAT GAACGTTCTT
TCATGGTTAG AAGATTATCT TAAAAGTTAT CAAGGTGCAT TGCTTATCGT CTCTCACGAC
CGTTACTTCT TAGATCGTGT TGTCAGCGAT GTTTATGATC TCGATAATAA AACACTCACC
CACTATACTG GTAACTACAC GCAATTTGTT AAACACAAGC AAGAACGATT ACAGGCAGAG
TGGAAACACT ATGACCAACA ACAAAAAAAG ATTGCTAAGT TAGAAGACTT TGTTAATCGA
AATATTGTTC GTGCCTCAAC GACCAAACGT GCCCAGGCGC GGCGAAAGCA ATTAGAAAAA
ATGGAGCGGC TTGAGCGTCC AGAAACTGAT GATAAATCAA TCCATTTCCA ATTCCATTCT
GAAAAAGATA GTGGAAATGA AGTTCTTGAT GTGGAGCAGG CAAAAGTTGG CTACGATGAA
CAGATCCTTG CTGGGCCGCT TTCATTTAAT GTTCGCAAGC CGCAGCGTGT TGGGATTATC
GGACCAAATG GAATCGGAAA ATCAACTTTA CTTAAATCTA TTCTCCATAA AATTCCGTTA
ATTAGTGGAA CAATCAAACT CGGTGCTAAC CTCGATATCG GTTACTATGA CCAGGAACAA
CAACAATTGC ACCCAAATAA AACCGTTTTA GAAGAAGTAT GGGATGACCA TCCAGAAGTA
CCTGAAAAAG ATATTCGCTC ATTATTAGGT AGTTTCTTAT TCGTTGGTGA TGATGTTTAT
AAAGTCGTTC ATGACCTATC TGGTGGTGAA AAGGCACGAT TGGAGTTAAC TAAACTCTCA
TTTAAACCGA TTAATTTTCT TATCCTTGAT GAACCGACTA ACCACTTAGA TATCGATAGT
CGAGAAGTGC TCGAAAACGC AATTAACGAA TTTAGCGGAA CCGTTCTCTT TATTTCTCAC
GACCGTTACT TTATTAATCA GGTTGCAACC GATATCCTAG CAATGGAACA TGATGGAATT
AAACATTATG AAGGCAATTA TGATGACTAT CTAGTTGCTA AGGAAAAAGA AAGTTCACCT
AAAGCTACTT CGCATAATTC CAACACGATC GCTAAAGCAC CAGCTGGTAA GCAATCTTAT
CAGCAGAGTA AAGAACAACA GCGTGCTCGC CGAAAAATTC AGCGACAAGT CGATGAACTA
GAACAACAGA TGACGGAATT AGAAGAAAAG CAAACTGCAA TTCAAGAACA AATGAGCCAA
CCAGAAATCG CTACGGATAT TGGAAAATTA ACCGATCTCC AAAAAGAACT TGATGAATTA
TCAGCTAAAT CCGAAGAGGT CGAACTTGCA TGGACAGAAG CAGCAGAAAA ACTGGAAGAA
TTTGATCAAG AAAACTAG
 
Protein sequence
MLLLQTNDVV RRFGADVLFH NMNMQIQEHG RTALVGRNGA GKTTLLKMIA GITEPDEGTI 
TKVKDLTIGY LAQDQGLDSQ NSIWTELDTV FAPLHKMETQ IHDLEQQLAD LDSSESNYQQ
ILSTYDNLQT AFKKRGGFEY ESRMRGILHG FGFGEDSYDT PINSLSGGQK TKLALAKILL
QAPGLLILDE PTNHLDMNVL SWLEDYLKSY QGALLIVSHD RYFLDRVVSD VYDLDNKTLT
HYTGNYTQFV KHKQERLQAE WKHYDQQQKK IAKLEDFVNR NIVRASTTKR AQARRKQLEK
MERLERPETD DKSIHFQFHS EKDSGNEVLD VEQAKVGYDE QILAGPLSFN VRKPQRVGII
GPNGIGKSTL LKSILHKIPL ISGTIKLGAN LDIGYYDQEQ QQLHPNKTVL EEVWDDHPEV
PEKDIRSLLG SFLFVGDDVY KVVHDLSGGE KARLELTKLS FKPINFLILD EPTNHLDIDS
REVLENAINE FSGTVLFISH DRYFINQVAT DILAMEHDGI KHYEGNYDDY LVAKEKESSP
KATSHNSNTI AKAPAGKQSY QQSKEQQRAR RKIQRQVDEL EQQMTELEEK QTAIQEQMSQ
PEIATDIGKL TDLQKELDEL SAKSEEVELA WTEAAEKLEE FDQEN