Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0296 |
Symbol | |
ID | 5190051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 344787 |
End bp | 345578 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590101 |
Product | extracellular solute-binding protein |
Protein accession | YP_001270903 |
Protein GI | 148543533 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTT GGAAGAAAGC ACTATTAACA ATTGCAGCCT TAACAGTCGG CACCTCCGCA GGAATTACAA GCGTTTCTGC CGCTTCATCA GCTGTTAATT CAGAATTAGT TCATAAGGGA GAATTGACAA TTGGTCTTGA GGGAACGTAC TCTCCGTACT CTTATCGTAA AAATAACAAA TTAACTGGCT TTGAAGTAGA TCTTGGTAAA GCAGTTGCTA AAAAGATGGG CTTAAAAGCT AACTTTGTAC CAACTAAATG GGATTCGCTA ATTGCCGGTC TTGGTTCAGG CAAGTTTGAT GTAGTAATGA ACAACATTAC ACAGACACCT GAACGGGCCA AGCAATATAA TTTCTCTACC CCATATATCA AGTCCCGGTT TGCATTAATT GTTCCTACTG ATAGTAACAT CAAAAGCTTG AAGGATATTA AAGGCAAGAA GATTATTGCT GGTACGGGAA CTAATAATGC GAATGTGGTT AAAAAATATA AGGGTAACCT TACACCAAAT GGCGATTTTG CTAGTTCCTT AGATATGATC AAGCAAGGTC GGGCTGCCGG GACAGTTAAC TCCCGTGAAG CTTGGTACGC TTACAGCAAG AAGAACAGTA CTAAGGGTCT CAAGATGATT GATGTTTCTA GTGAACAAGA TCCAGCTAAG ATTTCAGCAC TTTTTAACAA GAAAGATACT GCTATTCAAT CTTCCTACAA CAAGGCACTG AAGGAACTTC AACAAGATGG AACAGTCAAG AAGCTATCTG AAAAGTACTT CGGTGCAGAT ATTACTGAAT AA
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Protein sequence | MKFWKKALLT IAALTVGTSA GITSVSAASS AVNSELVHKG ELTIGLEGTY SPYSYRKNNK LTGFEVDLGK AVAKKMGLKA NFVPTKWDSL IAGLGSGKFD VVMNNITQTP ERAKQYNFST PYIKSRFALI VPTDSNIKSL KDIKGKKIIA GTGTNNANVV KKYKGNLTPN GDFASSLDMI KQGRAAGTVN SREAWYAYSK KNSTKGLKMI DVSSEQDPAK ISALFNKKDT AIQSSYNKAL KELQQDGTVK KLSEKYFGAD ITE
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