Gene Lreu_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0221 
Symbol 
ID5189021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp256263 
End bp257252 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content41% 
IMG OID640590017 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_001270828 
Protein GI148543458 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000000342806 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGC AATATTTTGA TCAAAATTTA AAAATCTTTG CGTTAAATTC AAATCGTCCC 
TTAGCAGAAA AGATTGCTAA GCATGTCGGG GTTGATTTAG GAAAATTATC TGTTAATCGT 
TTTAGTGATG GTGAGATCCA AATTAATATT GAGGAAAGTG TGCGGGGAGA CAATGTTTAT 
GTCATCCAGT CGACTTCCGC CCCAGTTAAT GACAACTTAA TGGAGTTATT AATTATGGTG 
GATGCGCTTC GTCGTGCTAG TGCCAAGACG ATTAACGTGG TGATGCCATA CTATGGTTAT 
GCCCGTCAAG ACCGAAAAGC ACGGAGCCGT GAACCAATCA CTGCTAAGTT GGTTGCTAAT 
ATGTTGCAAA ATTCCGGTGT TGATCGGATT ATTGCACTTG ATCTTCATGC CGCACAAATT 
CAAGGGTTCT TTGATATCCC TGTCGATCAT TTGATGGGTG CTCCGCTTTT AGCAGAGTAT 
TTTATCAACC AGGGTGTTGC TGAAAATGCA GTTGTTATTT CTCCTGATCA TGGTGGAGTA 
ACACGGGCAC GAGCACTTGC CGAGTTTTTA AAATCTCCAA TTGCGATTAT TGACAAGCGG 
CGTCCACGGG CGAACGTTGC TCAAATCATG AATATTATTG GAGACGTTAA GGGTAAGAAG 
TGTATTATGA TTGATGACAT GATTGATACT GCGGGAACTA TTAGTTTAGG TTCGCAAGCA 
TTAATAGATG CCGGCGCAGA AGAAGTCTAC GCATCATGTA CCCATGCGGT ATTATCTGGC 
CCAGCAATTG AACGTTTACG GAATGCACCG CTTAAAGAAG TGGTTGTGAC AGATTCGATT 
CAATTACCAA AGGAAAAACA AATCGATAAA ATCAAGCAGG TATCGGTTGC TCCACTAATT 
GGGGATGCAA TCAAACGGAT TAACGAAAAT CGTCCTGTTA GTCCACTCTT TAAACAGGTT 
TTCCAAAGTG CACAGTTGGA AAAGAAGTAA
 
Protein sequence
MTQQYFDQNL KIFALNSNRP LAEKIAKHVG VDLGKLSVNR FSDGEIQINI EESVRGDNVY 
VIQSTSAPVN DNLMELLIMV DALRRASAKT INVVMPYYGY ARQDRKARSR EPITAKLVAN 
MLQNSGVDRI IALDLHAAQI QGFFDIPVDH LMGAPLLAEY FINQGVAENA VVISPDHGGV 
TRARALAEFL KSPIAIIDKR RPRANVAQIM NIIGDVKGKK CIMIDDMIDT AGTISLGSQA 
LIDAGAEEVY ASCTHAVLSG PAIERLRNAP LKEVVVTDSI QLPKEKQIDK IKQVSVAPLI 
GDAIKRINEN RPVSPLFKQV FQSAQLEKK