Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0210 |
Symbol | |
ID | 5188883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 245556 |
End bp | 247583 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640590006 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_001270817 |
Protein GI | 148543447 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAC AAAAACCAAC TTATTACATT ACAACACCAA TTTACTATCC ATCTGGTAAA CTCCATATTG GTAATTCATA CACAACAATT GCATGTGATG CAGAAGCACG TTTTAAGCGT TTGATGGGCT ATGACGTATT CTACTTGACA GGAACCGATG AGCATGGCCT TAAGATTGAA CAAAAGGCTG AAAAACTCGG CATGAAGCCA CAAGAATACG TTGATCAAAT GGCTGCCCAA ATTAAAGAGC TATGGAAAAA ACTTGAAATT ACAAATGACA AGTTTATTCG GACAACCGAT GACTACCATG AAAAAGCTGT CCAAAAGATT TTTCAACAAT TGCTTGACCA AGGGGATATT TACAAGGGCA AGTATACTGG TTGGTACTCA GTTGATGATG AAGAATACTT CACAGAAAGT CAGTTAGCAG AAGTTTACCG TGATGAAGAC GGTAATGTGA TCGGTGGAAA AGCGCCATCA GGTCATGAAG TTCAATTAGT TGAGGAAGAA TCATACTTCT TTAAGATGAG CAAGTATGCT AACTGGTTAA TGAACTACTA TAAGGAACAT CCTGATTTTA TCGAACCGCA ATCACGGATG AATGAAATGA TTAATAACTT CTTAAAGCCA GGACTAGAAG ATCTTGCAGT TACGCGGACA TCATTTAACT GGGGGGTTAA GGTTCCTAGT GATCCTAAGC ACGTGGTATA CGTATGGATT GATGCATTAT CAAACTATAT TACTGCGCTG GGATATGGTA GTGATGATGA TAGTCTTTTC AAGAAGTACT GGCCTGCTGA TGTTCACATG GTAGGAAAAG AAATTGTTCG TTTCCATACG ATTTACTGGC CAATCATGCT TCATGCGCTT GGCTTACCAT TGCCAAAACA CATCATCGGT CATGGTTGGT TAACAATGCG TGACGGTAAG ATGTCGAAAT CAAAGGGAAA TGTTATTTAT CCTGAAACTC TTGTTGATCG CTACGGCCTT GATGCCACAC GTTACTACTT ATTGCGGGCA ATGCCATTTG GTAATGATGG CGTCTTTAGT CCAGAAGACT TTGTTGATAA GGTAAACTAT GACCTTGCTA ACGATCTAGG AAACTTGCTC AATCGGACTG TTGCGATGAT TAATAAGTAT CAAAATGGTA AATTAGTTGG CACTAATGAT GCAACGACTG ATTTTGATGC TGATTTAGAA CAAACTGCTA GTGATGTAAT TGCTGAGTAT AAAGAATTAA TGGATAAAAC ACGGTTTGCT GAAGCATTGG CAACTGTTTG GAAGTTGGTT AGTCGTGCTA ACAAGTACAT TGATGAAACT GAACCATGGG TACTAGCAAA AGATGATAGT AAGAAGGATG TATTATCAGA TGTGATGACC CATCTAGCAA AGAGTTTGTG GATTATTGCA GCCTTAATTC AACCAATTAT GCCGCATGCA CCAAAGCAAA TTGTTGAACA ACTTGGGATT GAAGGGACTG ACTTATCATT AACTGATCTT CAATTTAATG ATTTCCCAGC AGAAGCTCAG GTTGTCGCCA AAGGAACTCC GATCTTCCCA CGTTTGGATG TGAAGGCCGA GGTTGAATTT ATTAAGAGCA AGATGACAGC AAACGAAAAG AAGAAAGGAA GAAAGGCAAT GGCTGAAGCA AAAGAAAAAG CCCAAGAAAC AGCACAAGAA GAGAAAACAG ATGGCAAAAA GCCAATTCGG ATTGATGTCT TTGACAAAGT TGAATTGAAA GTAGCTCAAA TCACTGCTGC CGATCATGTA GAAGGTGCTG ATAAGCTTCT AAAATTCCAC ATGGATGATG GAACAGAAGA AGGCCGGCAA ATCCTTTCTG GAATTGCCAA ATGGTATCCA GACCCTTCTG TTTTAGTAGG TAAGAAAGTT TTGATTGTTG CTAACTTGAA ACCACGGAAA ATGCGGGGCG AATTAAGCCA AGGAATGCTT TTGTCTGCTG AAAAAGACGG TAATGTTCAA GTAGTAACTG TTCCTGACAA TTTAGTACCT GGAATGGGCG TTGAATAA
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Protein sequence | MAEQKPTYYI TTPIYYPSGK LHIGNSYTTI ACDAEARFKR LMGYDVFYLT GTDEHGLKIE QKAEKLGMKP QEYVDQMAAQ IKELWKKLEI TNDKFIRTTD DYHEKAVQKI FQQLLDQGDI YKGKYTGWYS VDDEEYFTES QLAEVYRDED GNVIGGKAPS GHEVQLVEEE SYFFKMSKYA NWLMNYYKEH PDFIEPQSRM NEMINNFLKP GLEDLAVTRT SFNWGVKVPS DPKHVVYVWI DALSNYITAL GYGSDDDSLF KKYWPADVHM VGKEIVRFHT IYWPIMLHAL GLPLPKHIIG HGWLTMRDGK MSKSKGNVIY PETLVDRYGL DATRYYLLRA MPFGNDGVFS PEDFVDKVNY DLANDLGNLL NRTVAMINKY QNGKLVGTND ATTDFDADLE QTASDVIAEY KELMDKTRFA EALATVWKLV SRANKYIDET EPWVLAKDDS KKDVLSDVMT HLAKSLWIIA ALIQPIMPHA PKQIVEQLGI EGTDLSLTDL QFNDFPAEAQ VVAKGTPIFP RLDVKAEVEF IKSKMTANEK KKGRKAMAEA KEKAQETAQE EKTDGKKPIR IDVFDKVELK VAQITAADHV EGADKLLKFH MDDGTEEGRQ ILSGIAKWYP DPSVLVGKKV LIVANLKPRK MRGELSQGML LSAEKDGNVQ VVTVPDNLVP GMGVE
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