Gene Lreu_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0201 
Symbol 
ID5188971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp235025 
End bp237343 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content39% 
IMG OID640589997 
Productsuperfamily I DNA/RNA helicase-like protein 
Protein accessionYP_001270808 
Protein GI148543438 
COG category[R] General function prediction only 
COG ID[COG3973] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC ATGAACGAGA AACGGAGCAA GCGCGGGTTG ATAATGTTGA AAAACAAATT 
GACCAACAGG TAGCTGCTAC CACTAAAGCT GTTGAAGATG CTCATCGTGA AACACGAGCA
GTTGAACGTA ATTATAGTGA AAATGCATCT ATTAACCGTT ATGAAGTTGA TGATATTGCC
GAATCTCGGT CAATGATTGA ACAGCAGCGA CAATTGGTTT CACGAGCAGC GGAAAGTGAA
TCAATTCTAA AGCACCAGTT AAGAACTTTG AAAAACTTAA AAGGGTCACC GTATTTTGGC
CGGATTGATA TTCAAGATCC TGGTGAAGAT AAGAGTGAAA CGCTATATAT TGGTACTTCT
TCCTTAATGA ATGAAGATAA AACAGACTTT TTAATTTATG ACTGGCGGGC ACCGATTTCT
GGGGTTTACT ATAATGGTAC CCTTGGGAAA GTCAATTATG AAACGCCAGC TGGGATGCAA
ACCACAGAAT TAAAAAAGAA ACGCCAATTC ACTATTAAGG ATGGTAAGAT CACTAACATG
TTTGATACCA ATGAAACGGT TGGTGATGAA GTTTTGCAAG CAGCTCTTGG AAAGCAAAAT
GACCAGTATA TGCATAATAT TGTGGCAACA ATTCAAAAAG AGCAAAATGA TATTATCCGT
GATACGCGTA GTGATCTTTT GCTAGTACAA GGAGTGGCTG GTTCAGGAAA GACTTCAGCG
ATCCTTCAGC GAATTGCATA CTTGCTTTAT CATAGTCGAA CAGAATTGAA TGCTGACCAG
ATTGTCCTCT TTAGTCCCAA TAATTTATTT AGCCACTATA TTTCTGAAGT TTTGCCAAGT
CTTGGTGAAA GAAATATGCG GCAAGTAACA TTAGAAGGGT TTATCCGGCG GCGTTTTGAA
GGCTTGCAAG TAGAAACATT ATTTGATCGC TATGAAGAAC GGCAAAAACC TGAAAATGCT
TCTCATGTTG TTGCTGACTT TATTGAAAGT GAATCTTTTA TGACGTCAAT TGCACATTAT
GTCGAGAAAA TGACAATTGA TGATTTGCAG TTTGCTGATA TTCGCTTTAA TGGTCAAGTT
TTCTTTTCGG CTGATCACGT CAAAGATCTT TATAAAGAAT TACCATTGAC GATGGCTCCT
GCTGATAAGT TAGTTCAATT GAAAAATAAG TTAATTCGTG AATTGCAGCG GCGAGTTAAA
GATGAAGCTA AAAAAGATTG GGTAGCTAAA GAACTGGATT CACTTGATTT ACAACAATTG
CACAACCTTT ATGGTAAGAA GACAATTGAT GACTTTAAGG ATGAAGATGA GCAATATGCT
TACCTTTCGC GGCGCTTAGC TAAACGACGC TTACGTGTGA TTGCAGATGC GATCTATAAT
AATTACTTTC TCGATTTTTA TAATCAATAT AATAAGTTTT TGCATCAAGT TGAGGTACCT
AAGACAATTA GTCAGCGGGA ATGGGCAACA ATGATCCTTG CTTTTCAAGA TGAGATTGAA
TACCATCGGC TGGAATTAAT GCATGCGGCA CCTTTGATGT ATCTGCGTGA TTTGATTTCC
GGGACAGGAC AAAATCGTTC TTTTCAATAT GTATTTATTG ATGAGATGCA AGATTATTCA
ACAGCGATGT TAATCTACTT AAAACACGCC TTTCCCCAAG CTAAATTTAC GGTCCTCGGT
GATAGTGAAC AGGCTCTTTT TAAGCCATTG CAATTACCGG AAGAGTTATT AAACAAACTT
AGTGGGGTAT TAAAGGCCAA GCGACCTAAT CTAATTGCTT TACGGCGGAG TTATCGTTCC
ACGACGGAGA TTACTAATTT TGCGAAGGCC TTGTTGCCGG ATGGAGATAA GATAATTTCT
TTCACTCGCC ATGGAAAGAA ACCACGCTTG TTAGTCCGTT ATTCTGATAA AGAGAGTCAG
CAAAGCTTGT TAGATGAGAC GCTTAAATTA GCTGACGAAC ATGAAACTGT AGCGATCTTA
ACCAAGAATC AAGAGCAAGC CGCTGGTATT TATCAATTAC TTCACCGGCA AAAGGTTGAA
AATATTCATC TCCTCGATAA GGATGCAAGT GAATTGCCAA AGGGAGTCTT AATTCTCCCA
ATTTACTTAG CAAAGGGGCT TGAATTCGAT GCTGTTCTTG CTGCGGATGT CTCTGCTAAA
AACCTAACTA ATACTGATGA AGTTGGTATG ATCTATACAA TGGCATCACG GGCAATGCAT
GAACTGGTCC TTTTAAGCAA CGGCTCAGTT AGCGATGCAA TTAACGAGAA AGCTGGGCGT
CTTTTAACGA TTGAATATCA ATTGCCAAAT AAAAATTAA
 
Protein sequence
MENHERETEQ ARVDNVEKQI DQQVAATTKA VEDAHRETRA VERNYSENAS INRYEVDDIA 
ESRSMIEQQR QLVSRAAESE SILKHQLRTL KNLKGSPYFG RIDIQDPGED KSETLYIGTS
SLMNEDKTDF LIYDWRAPIS GVYYNGTLGK VNYETPAGMQ TTELKKKRQF TIKDGKITNM
FDTNETVGDE VLQAALGKQN DQYMHNIVAT IQKEQNDIIR DTRSDLLLVQ GVAGSGKTSA
ILQRIAYLLY HSRTELNADQ IVLFSPNNLF SHYISEVLPS LGERNMRQVT LEGFIRRRFE
GLQVETLFDR YEERQKPENA SHVVADFIES ESFMTSIAHY VEKMTIDDLQ FADIRFNGQV
FFSADHVKDL YKELPLTMAP ADKLVQLKNK LIRELQRRVK DEAKKDWVAK ELDSLDLQQL
HNLYGKKTID DFKDEDEQYA YLSRRLAKRR LRVIADAIYN NYFLDFYNQY NKFLHQVEVP
KTISQREWAT MILAFQDEIE YHRLELMHAA PLMYLRDLIS GTGQNRSFQY VFIDEMQDYS
TAMLIYLKHA FPQAKFTVLG DSEQALFKPL QLPEELLNKL SGVLKAKRPN LIALRRSYRS
TTEITNFAKA LLPDGDKIIS FTRHGKKPRL LVRYSDKESQ QSLLDETLKL ADEHETVAIL
TKNQEQAAGI YQLLHRQKVE NIHLLDKDAS ELPKGVLILP IYLAKGLEFD AVLAADVSAK
NLTNTDEVGM IYTMASRAMH ELVLLSNGSV SDAINEKAGR LLTIEYQLPN KN