Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0201 |
Symbol | |
ID | 5188971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 235025 |
End bp | 237343 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640589997 |
Product | superfamily I DNA/RNA helicase-like protein |
Protein accession | YP_001270808 |
Protein GI | 148543438 |
COG category | [R] General function prediction only |
COG ID | [COG3973] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATC ATGAACGAGA AACGGAGCAA GCGCGGGTTG ATAATGTTGA AAAACAAATT GACCAACAGG TAGCTGCTAC CACTAAAGCT GTTGAAGATG CTCATCGTGA AACACGAGCA GTTGAACGTA ATTATAGTGA AAATGCATCT ATTAACCGTT ATGAAGTTGA TGATATTGCC GAATCTCGGT CAATGATTGA ACAGCAGCGA CAATTGGTTT CACGAGCAGC GGAAAGTGAA TCAATTCTAA AGCACCAGTT AAGAACTTTG AAAAACTTAA AAGGGTCACC GTATTTTGGC CGGATTGATA TTCAAGATCC TGGTGAAGAT AAGAGTGAAA CGCTATATAT TGGTACTTCT TCCTTAATGA ATGAAGATAA AACAGACTTT TTAATTTATG ACTGGCGGGC ACCGATTTCT GGGGTTTACT ATAATGGTAC CCTTGGGAAA GTCAATTATG AAACGCCAGC TGGGATGCAA ACCACAGAAT TAAAAAAGAA ACGCCAATTC ACTATTAAGG ATGGTAAGAT CACTAACATG TTTGATACCA ATGAAACGGT TGGTGATGAA GTTTTGCAAG CAGCTCTTGG AAAGCAAAAT GACCAGTATA TGCATAATAT TGTGGCAACA ATTCAAAAAG AGCAAAATGA TATTATCCGT GATACGCGTA GTGATCTTTT GCTAGTACAA GGAGTGGCTG GTTCAGGAAA GACTTCAGCG ATCCTTCAGC GAATTGCATA CTTGCTTTAT CATAGTCGAA CAGAATTGAA TGCTGACCAG ATTGTCCTCT TTAGTCCCAA TAATTTATTT AGCCACTATA TTTCTGAAGT TTTGCCAAGT CTTGGTGAAA GAAATATGCG GCAAGTAACA TTAGAAGGGT TTATCCGGCG GCGTTTTGAA GGCTTGCAAG TAGAAACATT ATTTGATCGC TATGAAGAAC GGCAAAAACC TGAAAATGCT TCTCATGTTG TTGCTGACTT TATTGAAAGT GAATCTTTTA TGACGTCAAT TGCACATTAT GTCGAGAAAA TGACAATTGA TGATTTGCAG TTTGCTGATA TTCGCTTTAA TGGTCAAGTT TTCTTTTCGG CTGATCACGT CAAAGATCTT TATAAAGAAT TACCATTGAC GATGGCTCCT GCTGATAAGT TAGTTCAATT GAAAAATAAG TTAATTCGTG AATTGCAGCG GCGAGTTAAA GATGAAGCTA AAAAAGATTG GGTAGCTAAA GAACTGGATT CACTTGATTT ACAACAATTG CACAACCTTT ATGGTAAGAA GACAATTGAT GACTTTAAGG ATGAAGATGA GCAATATGCT TACCTTTCGC GGCGCTTAGC TAAACGACGC TTACGTGTGA TTGCAGATGC GATCTATAAT AATTACTTTC TCGATTTTTA TAATCAATAT AATAAGTTTT TGCATCAAGT TGAGGTACCT AAGACAATTA GTCAGCGGGA ATGGGCAACA ATGATCCTTG CTTTTCAAGA TGAGATTGAA TACCATCGGC TGGAATTAAT GCATGCGGCA CCTTTGATGT ATCTGCGTGA TTTGATTTCC GGGACAGGAC AAAATCGTTC TTTTCAATAT GTATTTATTG ATGAGATGCA AGATTATTCA ACAGCGATGT TAATCTACTT AAAACACGCC TTTCCCCAAG CTAAATTTAC GGTCCTCGGT GATAGTGAAC AGGCTCTTTT TAAGCCATTG CAATTACCGG AAGAGTTATT AAACAAACTT AGTGGGGTAT TAAAGGCCAA GCGACCTAAT CTAATTGCTT TACGGCGGAG TTATCGTTCC ACGACGGAGA TTACTAATTT TGCGAAGGCC TTGTTGCCGG ATGGAGATAA GATAATTTCT TTCACTCGCC ATGGAAAGAA ACCACGCTTG TTAGTCCGTT ATTCTGATAA AGAGAGTCAG CAAAGCTTGT TAGATGAGAC GCTTAAATTA GCTGACGAAC ATGAAACTGT AGCGATCTTA ACCAAGAATC AAGAGCAAGC CGCTGGTATT TATCAATTAC TTCACCGGCA AAAGGTTGAA AATATTCATC TCCTCGATAA GGATGCAAGT GAATTGCCAA AGGGAGTCTT AATTCTCCCA ATTTACTTAG CAAAGGGGCT TGAATTCGAT GCTGTTCTTG CTGCGGATGT CTCTGCTAAA AACCTAACTA ATACTGATGA AGTTGGTATG ATCTATACAA TGGCATCACG GGCAATGCAT GAACTGGTCC TTTTAAGCAA CGGCTCAGTT AGCGATGCAA TTAACGAGAA AGCTGGGCGT CTTTTAACGA TTGAATATCA ATTGCCAAAT AAAAATTAA
|
Protein sequence | MENHERETEQ ARVDNVEKQI DQQVAATTKA VEDAHRETRA VERNYSENAS INRYEVDDIA ESRSMIEQQR QLVSRAAESE SILKHQLRTL KNLKGSPYFG RIDIQDPGED KSETLYIGTS SLMNEDKTDF LIYDWRAPIS GVYYNGTLGK VNYETPAGMQ TTELKKKRQF TIKDGKITNM FDTNETVGDE VLQAALGKQN DQYMHNIVAT IQKEQNDIIR DTRSDLLLVQ GVAGSGKTSA ILQRIAYLLY HSRTELNADQ IVLFSPNNLF SHYISEVLPS LGERNMRQVT LEGFIRRRFE GLQVETLFDR YEERQKPENA SHVVADFIES ESFMTSIAHY VEKMTIDDLQ FADIRFNGQV FFSADHVKDL YKELPLTMAP ADKLVQLKNK LIRELQRRVK DEAKKDWVAK ELDSLDLQQL HNLYGKKTID DFKDEDEQYA YLSRRLAKRR LRVIADAIYN NYFLDFYNQY NKFLHQVEVP KTISQREWAT MILAFQDEIE YHRLELMHAA PLMYLRDLIS GTGQNRSFQY VFIDEMQDYS TAMLIYLKHA FPQAKFTVLG DSEQALFKPL QLPEELLNKL SGVLKAKRPN LIALRRSYRS TTEITNFAKA LLPDGDKIIS FTRHGKKPRL LVRYSDKESQ QSLLDETLKL ADEHETVAIL TKNQEQAAGI YQLLHRQKVE NIHLLDKDAS ELPKGVLILP IYLAKGLEFD AVLAADVSAK NLTNTDEVGM IYTMASRAMH ELVLLSNGSV SDAINEKAGR LLTIEYQLPN KN
|
| |