Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0166 |
Symbol | |
ID | 5188592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 198736 |
End bp | 200154 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640589962 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001270775 |
Protein GI | 148543405 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTA TTAACAAATC AAAAAATAGT CCTGAGCCAG TGATTGGTTT TAGTGAAAGT TTACTTATTC TTGGCGTTAT TTTATGCATC TTAGGCTACC CTATTATTTT TAAGCACCAA GAACCGCAAG CCCCATTATT TATTTCCCTT GTTTTGCTCG CCGTTTACGG ACGAATTCGT GGATTTAAAT GGGATACCAT AATGAATGGA ATGCGTCATG GTTTGCGAGC CGGTGTTGAC CCCCTCATTA TCTTTCTTTC TATCGGTGTC TTAATTGCTA CCTGGATTTT CTCGGGAACT ATTCCAACAA TTATGTACTT TGGGTTTGAA ATCATTTCTG TAAAGTTCTT CCTCCCAACA GTTTTTATTG TTTGTACCCT TGTTGGAGTC GCTTGCGGAA GCTCATTTAC AACTGTATCA ACAATGGGGA TCGCCTTTAT TGGCATTGGT GCAACCCTTA AAATCAACCC CGGTTTAACT GCGGGGGTAA TTGTTTCAGG CGCCTTTTGT GGTTCAAATA TTTCCCCGCT TTCAGGAACC ACCAACCTTG CCGCCAGTGT TGGTGAAATT AGTATCTACA AGCATATTAA ATCCTTACTC ACCACCGATA TTCCTGCCTG GGCAATCTGT CTTATTCTTT ACACCTTCTT AGGGTTAAAC TCCAAAAATG TTAGCTTAGG TGCCGTTCAC CAAATGATGG CCGGGCTACA AAATGGGTTC TGGATCTCCG GATGGGCTCT TCTCCCAGTT CTGCTCCTAA TCGTATTAGC CATTTTCCAA GTTCCTGCTA TTCCTTCCCT TGGCCTTGGC TCACTCTTTG CGGTCGTACT TGGCTGGATT CATGCACCTA AAACCAGCCT CACTACGATT ACTAATACCA TCATGACTGG TTACGTTTCC CATACCGGTG ATAAAACAAT CGATACATTG CTTTCTAAAG GCGGTATCTC TAGTATGCTT ACTTCTCTAG CCCTAATTAT CTTTGCCCTT GCTTTAGGTG GCTTATTGAT CAAGTTCAAT ATTATTAGCG CCATCATTAA TCACTTAACT GGGATTGTAA AGACGCCTGG TCGATTAGCA TTCTCCACAG CTCTTACCTG TATTGGGGTT AACCTCCTTG TTGGGGAACA CTACCTCGCA ATTATTCTTC CTGGGCAATC ATTTCTCCCG TCATTTGATA AATTAGGCTT AAAACGGGTT GATTTAACTC GGATTCTCAA TGACGCAGGG GCCGCAGTCA ACGCAATTGT CCCATGGAGT GTTTCTGGGG TATTCATCGC TAGTACCTTA CAAATCAATC CATTAAGTTT CATTCCTTGG GTATTTTTCC CATTCCTCGT TACAATCCTA ACTATCATTG CAGGAATGCT CGTGAAAGTC CCAGTCAAAA GCCCTGCTGC AAACTTAGCA ACTGAATAA
|
Protein sequence | MKIINKSKNS PEPVIGFSES LLILGVILCI LGYPIIFKHQ EPQAPLFISL VLLAVYGRIR GFKWDTIMNG MRHGLRAGVD PLIIFLSIGV LIATWIFSGT IPTIMYFGFE IISVKFFLPT VFIVCTLVGV ACGSSFTTVS TMGIAFIGIG ATLKINPGLT AGVIVSGAFC GSNISPLSGT TNLAASVGEI SIYKHIKSLL TTDIPAWAIC LILYTFLGLN SKNVSLGAVH QMMAGLQNGF WISGWALLPV LLLIVLAIFQ VPAIPSLGLG SLFAVVLGWI HAPKTSLTTI TNTIMTGYVS HTGDKTIDTL LSKGGISSML TSLALIIFAL ALGGLLIKFN IISAIINHLT GIVKTPGRLA FSTALTCIGV NLLVGEHYLA IILPGQSFLP SFDKLGLKRV DLTRILNDAG AAVNAIVPWS VSGVFIASTL QINPLSFIPW VFFPFLVTIL TIIAGMLVKV PVKSPAANLA TE
|
| |