Gene Lreu_0134 details

Gene Information

• Locus tag: Lreu_0134
• ID: 5189258
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 160637
• End bp: 161122
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640589926
• Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
• Protein accession: YP_001270743
• Protein GI: 148543373
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
• TIGRFAM ID: [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00281545
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATA TTAGTGTCGT GATGGGCAGT AAATCAGACT GGCCAACTGT TAAAGAAACT 
TGTGATATTT TAGATGAATT TGGTGTTTCA TATGAAAAGA ATGTGATTTC TGCTCATCGG 
ATGCCAAATG AAATGTTCGC GTTTGCGCAA AATGCGGTTG ATAATGGGGT TAAAGTAATT 
ATTGCATGTG CTGGGGGAGC AGCTCATCTT CCCGGAATGA TTGCGGCAAA TACCCCCCTG 
CCAGTAATTG GGATCCCAGG ACAGACAAAA GCTCTTGGTG GCATGGACTC GCTTTTATCA 
ATTGTTCAAA TGCCAGCGGG AATTCCGGTG GCAACCACTG CGATTGGAAA AGCAGGCGCT 
AAAAATGCAG CGTTATTAGC ATTGCAAATT CTGGGGATCA CAGATAAGCA TATCCAACAA 
CAAATCATCG AATATCGACA GGCGATGCAT GATCAAGCAA AAGAAAGTGG GCAGTATCTT 
GAATAA 

 

Protein sequence

MSDISVVMGS KSDWPTVKET CDILDEFGVS YEKNVISAHR MPNEMFAFAQ NAVDNGVKVI 
IACAGGAAHL PGMIAANTPL PVIGIPGQTK ALGGMDSLLS IVQMPAGIPV ATTAIGKAGA 
KNAALLALQI LGITDKHIQQ QIIEYRQAMH DQAKESGQYL E