| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0113 |
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| Symbol | |
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| ID | 5188745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 139204 |
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| End bp | 140502 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640589905 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001270722 |
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| Protein GI | 148543352 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000787887 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATGG TTGATATCAT TGACACCAAG AGAAATGGCG GCGTTCTGAG TGATGAGCAA
TTACAATTCT TTGTTGATGG CGTCGTTAAT GGAACGATTC CTGACTATCA AATCAGTGCT
CTCCTTATGG CAATCTACTT CCAGGATATG ACCAAAGAAG AACAGACGAG CCTAACAATG
AAGATGATGG AGTCTGGTGA ACGATTAGAT TTGAGCCGAA TCCCTGGAAT TAAGGTTGAT
AAACATTCAA CGGGTGGTGT TGGTGATAAA GTGAGTCTGC CACTTGCAGC AATGGTCGCC
GCTACAGGAA TTCCGGTTCC AATGATTTCA GGTCGTGGCC TTGGTCATAC AGGAGGCACG
CTTGACAAGT TAGAAGCGAT TCCAGGATTT CGGGTAGAAC TTTCCGAAGA TGAGTTCATT
AATCAAGTTG CCAAAGAAAA ATTAGCAATT GTAGGTGCGA CTGGTGAGGT TGCGCCAGCG
GATAAGAAGA TTTATGGATT ACGGGATGTT ACTGACACTG TTGACTCAAT TCCGTTAATT
GCTAGTTCAA TTATGAGTAA GAAGATTGCT TCTGGAACAG ATGCGCTTGT AATTGATGTT
AAAACTGGTA CTGGTGCCTT TATGAAGACC CTTGATCAAT CAAGACTACT GGCTAAAGCG
TTAGTTGAGA TTGGTAAACA AGCAGGATTA AAGTGCATGG CAGTAATCTC AGATATGAAC
CAGCCACTTG GAAATAAAAT TGGTAATGCC CTTGAAATTG AAGAATCAAT TGATGTCTTA
AAAGGAAAGG GACCAAAAGA TCTTACTGAA TTAGTTTTGA CGCTTGGTAG TTATATGGTT
GTAATGGGTG AAAAAGCACA AAACACTACT GAAGCACGAA AGATGTTAGA GCAAACTATT
CAGGATGGAT CAGCCTTTGA ACGGTTTGCA GCAATGATAA AAGCACAAGG TGGAGATCCA
GCTGTTGTTG ATAACTATCA ATTAATGCCG CAAGCTAAAT ATAAGATTCC GTTCAAAGCT
GATCGGGATG GAGTATTGAC AAAGCTTTCA GCGGATGAAG TTGGAACTGC CAGCATGTTA
TTAGGCGGAG GCCGTCAAAA GGCAGATGAT GCCCTTGATT ATAGTGTAGG AATTGAATTA
CACCATAAGC TGGGTGATTA CGTTAAAGAT GGCGAACCAA TTTTAACAAT CTATAGTAAC
CGCCAAGAAA TTCCAGATAT AGAACAGTTG CTAAGAGAAA GTATTAAAAT TAGCGATGAT
GGCAAAGTAC CAACGTTAAT TCATGAAATT ATTGAATAA
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| Protein sequence | MRMVDIIDTK RNGGVLSDEQ LQFFVDGVVN GTIPDYQISA LLMAIYFQDM TKEEQTSLTM
KMMESGERLD LSRIPGIKVD KHSTGGVGDK VSLPLAAMVA ATGIPVPMIS GRGLGHTGGT
LDKLEAIPGF RVELSEDEFI NQVAKEKLAI VGATGEVAPA DKKIYGLRDV TDTVDSIPLI
ASSIMSKKIA SGTDALVIDV KTGTGAFMKT LDQSRLLAKA LVEIGKQAGL KCMAVISDMN
QPLGNKIGNA LEIEESIDVL KGKGPKDLTE LVLTLGSYMV VMGEKAQNTT EARKMLEQTI
QDGSAFERFA AMIKAQGGDP AVVDNYQLMP QAKYKIPFKA DRDGVLTKLS ADEVGTASML
LGGGRQKADD ALDYSVGIEL HHKLGDYVKD GEPILTIYSN RQEIPDIEQL LRESIKISDD
GKVPTLIHEI IE
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