Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0111 |
Symbol | |
ID | 5189680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 137255 |
End bp | 137929 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640589903 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001270720 |
Protein GI | 148543350 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000645513 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTAA CGCAAGCACA ATTAGCAAAA TACATGGATC ACACAATGCT TAAACCAGAA GCTACTCCAG AGATGATTGA TAAGACAGTT GAAGAAGCTC GGAAATACAA CACAGCTTCA GTTTGTATCA ATCCTTACTG GGTTAAGCGA GTTCATGAAG GATTAGAAGG TACTGACATT AACACTTGTA CAGTTATTGG CTTCCCTCTC GGTGCAACTT CAACAGAAAG CAAAGTTTTT GAAACTAAGC AAGCAATTGA AGATGGCGCC GATGAAATTG ATATGGTTAT TAATATCGGT GAATTAAAAG CGGAAAATGA TGATGCAGTT GTTGCTGATA TTAAGGCGGT TGCTGATGCT ACTCACGAAA AGGGTAAACT TCTTAAAGTT ATTATTGAAA ATGCTCTTCT TACTGATGAA GAAAAAGCAC GTGCAAGTAA GCTTACTGTA AAAGGCGATG CTGACTTTGT TAAGACTTCA ACTGGTTTTT TAACTTCAGG AGCTAAGGTA GAAGACGTTA AGATTATGCG TGAAGCAGTT GGACCAGACT TTAAGATTAA GGCAGCTGGT GGAATTCACA GCCTTCAAGA AGCTTACGAT ATGATTGAAG CTGGTGCTAA CCGTTTAGGT GTTTCCGCTT CTGTTCAAAT CTTAGAAGAA GCCGCAAAAC AATAA
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Protein sequence | MKLTQAQLAK YMDHTMLKPE ATPEMIDKTV EEARKYNTAS VCINPYWVKR VHEGLEGTDI NTCTVIGFPL GATSTESKVF ETKQAIEDGA DEIDMVINIG ELKAENDDAV VADIKAVADA THEKGKLLKV IIENALLTDE EKARASKLTV KGDADFVKTS TGFLTSGAKV EDVKIMREAV GPDFKIKAAG GIHSLQEAYD MIEAGANRLG VSASVQILEE AAKQ
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