Gene Lreu_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0082 
Symbol 
ID5188981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp97278 
End bp99095 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content42% 
IMG OID640589877 
Producthypothetical protein 
Protein accessionYP_001270694 
Protein GI148543324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGATA ATTATCAAGC AATGAATTTT TACTATGGAC TTCTTAATTT GCGTGCCGGT 
TTTTTTAAGG CTGACTTATG CGAAATACTA ATGGCGATCG CACAGAGCGT ACCTGATAAA
AATCGACAAT CAGCAACGGC ATACCATACT GTAGAAGAGA ATTTAAGTCA AGACCGTGAA
CAATTGAAGC ATGATCAAGT TGAATTTGGA TCATTTTATG AAGATGGTCA TATTTTACAT
AATGTCAAAA TTAATACCCA ATCAGACTTT TTCCTCGATC CGACCCGGGA AGATACCGTC
AAGTGGCATG TTAGTTTCAC GGTTGCTAAA GATGTCCGAC CAGCCGATCA ATTTACTATT
CAGCTATCAT CAAATTTGAT GGTTGCGCCT AATGGTCATC CTGAAAAACC AGTTCCTGAC
TTTAGTGATC AAGATGGGGT TGTTATTGCG ATGGGGGCCT ATGACCGTGA TAAGCACGAA
CTTGTCTATA CTTTTACCAA TTACGTAACC GAGCATCGCC AAATAATTGG TGAATTAGAG
GGAGAATTAG CAATTGATCC ACTCACAACT CCAGAGAACG AATTTGGCTT GGAATGTTTT
ATAAGTGTTG ATGATCACCG AAAAGACTTT ACGATTGATA TCGACTATCC AGATCTTGCT
AACGACATGT TTCTCGGGAT TTCTAGCCGG ATGATGCATT TTGATAAGGA TCAGCAGCTC
TTTGAGGACA TTATCTATGT TAATCCAGCA CAAAAAGACC TTAATCATGC CTATATTGTC
TTTAACACGA GTGACCTAGT AGAAGAGTTA TCTAATGCCG TAGTAAAACC GTCAACAATG
CGGGTTGAGA TTTATCGTAA TTCACGGGGA TTAAAATTAC CTCAATCATA TGGGGTAAAC
CTTCAGCGAC TGCGGGATAT TACTAATCGA TTCCCGGTAG TGGAAGGCGA TCACCTTGTC
GAGGCACCTT ATACAATGTC CTTTGCTGAT AACAAGATGC GGTTGAATTT TGGTGCAGAC
CAGACTAATG ATTCCTATAT TATTAGGGTG GTTGGCCAAT ATAATGATGA GCTTGATGGA
ACAGTACGAT TACGGGCTCG TTTATTTGGG ATGGACCAGC AAAATGTTTA TATGAGTAAT
TCTACGGCTG CAACAGCTAC TGGCACTTCG ATGGTCGCAA GTGGTCATGC TATTTCTAAG
GAGAAGTTAG CGGAGGAGAC AGCGGACACA ACAGAAGACT TGAAGCAAGA AGAACCTTTT
GAATCTTCAG CAATTGAAGG AGTGGCGGAA GATGTTGGTA TTCCATCTGC TTCTGATAGT
CAGGAACAGT TTACTAGTTC TCAAGCGGAA GAAGAGGAAA TGCCGATCGA AGAAAACCAG
GAAGATATCC CGATTAATGA TGTTGCTGCA GAAGAGCAAG TTGAACCTCA AGAAGATTTC
CCGCAAAGTG CAATTTCAGT TCCAGATGAT GCAGCCGTTG AAGAAGAATC TGACTCATCA
GCTTATATAA TTTCATTTAA TTCAAATGAT GAAGAAGAGG CGACTGCTGC TGAACAAGAA
GGAAATCAGG CGGAAGCTCC TACAGTCAGT GCAGCAGTTG GTGGGGATGA ATTATCAATC
TCCTTTGATA TCACTCCGCA AGCGGCACCA GCAGAGACTA AAGAAGATCT AACAGAAGAA
ACTGAATCTT CAGATGGGAA AGAGGAGACA AGCGCAGCAC CATTACCAAT GCCAGGACGA
CGACCACCCC GCCGGCACAG TCGTTTTCAA AATACAACAC GGTCGAATCA TTCGTTGCGT
CATTTGCGGA GATTCTAA
 
Protein sequence
MMDNYQAMNF YYGLLNLRAG FFKADLCEIL MAIAQSVPDK NRQSATAYHT VEENLSQDRE 
QLKHDQVEFG SFYEDGHILH NVKINTQSDF FLDPTREDTV KWHVSFTVAK DVRPADQFTI
QLSSNLMVAP NGHPEKPVPD FSDQDGVVIA MGAYDRDKHE LVYTFTNYVT EHRQIIGELE
GELAIDPLTT PENEFGLECF ISVDDHRKDF TIDIDYPDLA NDMFLGISSR MMHFDKDQQL
FEDIIYVNPA QKDLNHAYIV FNTSDLVEEL SNAVVKPSTM RVEIYRNSRG LKLPQSYGVN
LQRLRDITNR FPVVEGDHLV EAPYTMSFAD NKMRLNFGAD QTNDSYIIRV VGQYNDELDG
TVRLRARLFG MDQQNVYMSN STAATATGTS MVASGHAISK EKLAEETADT TEDLKQEEPF
ESSAIEGVAE DVGIPSASDS QEQFTSSQAE EEEMPIEENQ EDIPINDVAA EEQVEPQEDF
PQSAISVPDD AAVEEESDSS AYIISFNSND EEEATAAEQE GNQAEAPTVS AAVGGDELSI
SFDITPQAAP AETKEDLTEE TESSDGKEET SAAPLPMPGR RPPRRHSRFQ NTTRSNHSLR
HLRRF