| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0067 |
|---|
| Symbol | |
|---|
| ID | 5189747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 82127 |
|---|
| End bp | 83476 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640589862 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001270679 |
|---|
| Protein GI | 148543309 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000104201 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTA TTATTGTTGG TTGTACACAT GCGGGAACAA TTACTGCCAC TCAAATTTTA
CAGAATCATC CAGAAACAGA AGTCACAATT TATGAACGGA ATGATAACGT TTCATTCCTC
TCATGTGGGA TTGCAGTTTA CTTGAGCGGT GATGTTGGTA ATCCAGATGC GATGTTTTAT
TCAAGCCCTG AACAACTTGC TGCCATGGGT GCAACAGTTC ATATGCAACA TAATGTAACT
GATATTGACC CTAAGACTAA GACAGTCACA GTGACAGACC TTGTGACAGG CGAAACAAAG
ACCGACCATT ATGATAAGTT AGTTGATACT ACTGGTTCTT GGCCAGTAAT TCCACCAATT
GAAGGTGTAG ATGGCCCTCA TGTTTATTTG TGCAAGAATT ACCATCATGC TAAAGAATTA
TTTAACGTTG CTAAAGATGC GCAACGAATT GTTGTGATTG GTGGAGGTTA TATTGGGGTT
GAATTAGTAG AAGCTTACAC TCGTCAAAAT AAGGACGTTA CATTGATTGA TGGGTCTCCA
CGGATGCTTC ATAAATACTT TGACCGCGAG TATACGGATC GAATTCAACA GGAATTTGTA
GATCACGGCG CCCACTTTGC TTTTGACCAA CGCGTAACTG GATTTGAAAA CCACGAAAAT
GGTGTAACCG TTAAGACGGA TAAGGGCAAC TACGAGGCAG ATATTGCTAT CCTCTGTGTT
GGCTTCCGTC CTAATACTGA TCTCTTAAAA GGTAAAGTTA AGATGCATGA TAATGGGGCA
ATCATTACGA ACGAATACAT GCAATCATCT GATCCAGATA TTTACGCTGC CGGAGATTCA
ACGGCTGTTC ACTATAACCC AACTGGCAAG GATGCATACA TTCCATTAGC TACTAACGCT
ATTCGGCAAG GAACAATTGT TGGAACAAAT CTCTTTGGTA ATACAATGCG CGATATGGGA
ACCCAATCTA GTTCTGGCTT AAACTTATAT GGAACAACGA TGGTATCATC TGGCTTAACT
TTGGAGAATG CCAAAGAAGC GGGCTTTGAT GCAGCTGCGG TGACAGTTGA AGACAACTAC
CGTCCAGAAT TTATGCCGAC AACAACTCCT GTATTAATGA CATTGGTGTG GGATAAGAAG
ACTCGGCAAA TTCTTGGTGG ACAGTTTATG AGTAAGCATG ATGTTTCTCA ATCTGCTAAC
ATTATTTCCT TATGTATCCA GGATAAGCAC ACGATTGATT ATTTAGCATT TGTTGATATG
CTTTTCCAAC CACACTTTGA TCGTCCATTT AACTATGTAA ATATTCTTGG CCAAGCGGCG
GTAAAGAAAC AAGCTGAATT AGAAAAATAA
|
|---|
| Protein sequence | MKVIIVGCTH AGTITATQIL QNHPETEVTI YERNDNVSFL SCGIAVYLSG DVGNPDAMFY
SSPEQLAAMG ATVHMQHNVT DIDPKTKTVT VTDLVTGETK TDHYDKLVDT TGSWPVIPPI
EGVDGPHVYL CKNYHHAKEL FNVAKDAQRI VVIGGGYIGV ELVEAYTRQN KDVTLIDGSP
RMLHKYFDRE YTDRIQQEFV DHGAHFAFDQ RVTGFENHEN GVTVKTDKGN YEADIAILCV
GFRPNTDLLK GKVKMHDNGA IITNEYMQSS DPDIYAAGDS TAVHYNPTGK DAYIPLATNA
IRQGTIVGTN LFGNTMRDMG TQSSSGLNLY GTTMVSSGLT LENAKEAGFD AAAVTVEDNY
RPEFMPTTTP VLMTLVWDKK TRQILGGQFM SKHDVSQSAN IISLCIQDKH TIDYLAFVDM
LFQPHFDRPF NYVNILGQAA VKKQAELEK
|
|---|
| |