Gene Lreu_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0040 
Symbol 
ID5188728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp41926 
End bp43320 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content37% 
IMG OID640589836 
Producthypothetical protein 
Protein accessionYP_001270653 
Protein GI148543283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAC TATCTATTAA ACAACTAATA ATAATTACAT TGTGCTTATT AGTGCTGGTG 
GTTGGCTGCA TGACTATTCA CCAGCGTCGT CATTTTAATA AGAACGTTAA GATTGATAAT
GTGTCGGTTG GTGGATTGAC TGCTAAACAA GCATTAAAGA AGTTACAAGA TAATCCACAA
TCGCCAAAAA TTTATGTTAA CAATGAGTTA GTATTTACGG ATAAGCAATC AGTAGCAAAG
TTTAGTAGTG CTGACGAACA AAAAATTAAA AATGCATTAC ATAGTCAGTA TACTTTCTTC
CCATCATCTA AGGCAAAGAA CATTGCGATT AAGCCTCAAA ATGTTAATCA AGATGAAGTA
TCAAAGATTG ATCAAGCAGT CAGTCAAAAG GTAACAGAAT TAAATAATGG TCGAAAAGCT
CCTGTTGATG CTTACGCTGT ATACGAAAAT GGCCGAGTAC AAGTAAAACC AGCAGTTGGT
GGTACTCAAT ACAGTTTAGA TGGTTTGCAT AATAAAGTTG AGAATGAGAT TGCTGGCGGA
ACTATTTACT TGAGGCCAGT ATACAAAGCT CCGCTTTCTG CAAATAGTAA AACTGTTCAG
AATGAAAAAG CAAAGCTCGA AGAATTATCA AAACGATCTG TAACATACCA AGTACAAAAC
AAAAAGTACC AATTAAATTG TGGTGAGATT ATTACCAGAG CAACATATCA AAATGGAAAA
TATCACTTTA ACACTGGAGC AGCTAATTCA AAGATTGATG AAATTAATAA TACCCAAGCA
ACTCTTGGCA AATCATTTGA ATTCAAAACA CATGATGGAT CAGTGATCAA AACAACAGAT
GCTGGCTCGT ATGGTTGGAA GATCAGTAAA AAACAAGCTG GAAAGACTCT TACGAATGCA
TTGGTTGCAA ATAAGCAAAC AGTAAACGCC AAAAATGATA TCTATGGTAA AGGTTATAAT
CAACAAGGAA CTGGGTATAA TACTACAAGC AACAATGGTA TAGGGGACAC TTACGCCGAA
GTTTCACTAG CCGACCAACA TGCCTGGTTT TATAAAGATG GTAAGTGTGT TCTTAGTACT
GATATTGTTA GTGGGACGAA TGATAAAGGA AATGAGACGC CAAAAGGTGT CTGGTATATT
ATGTACCAGC AAACACCGTC TATCCTTCGA GGCCTTAACG ATGATGGTTC GAAATATGCA
AGTAAGGTCC AATATTGGTC ACCATTTACT GATAGTGGAT GTGGATTTCA TGATGCAAGC
TGGCGTCATG ACTGGTCAAA ACAAGCCTAT CTCGCTAAAG GTGGCGGATC GCATGGATGT
ATCAATATGC ATCCAGATGT TGCTGGTCAA GCCTTTCATG ACTTACAGAA AAATGAGCCT
GTAATTATCT ACTAA
 
Protein sequence
MQKLSIKQLI IITLCLLVLV VGCMTIHQRR HFNKNVKIDN VSVGGLTAKQ ALKKLQDNPQ 
SPKIYVNNEL VFTDKQSVAK FSSADEQKIK NALHSQYTFF PSSKAKNIAI KPQNVNQDEV
SKIDQAVSQK VTELNNGRKA PVDAYAVYEN GRVQVKPAVG GTQYSLDGLH NKVENEIAGG
TIYLRPVYKA PLSANSKTVQ NEKAKLEELS KRSVTYQVQN KKYQLNCGEI ITRATYQNGK
YHFNTGAANS KIDEINNTQA TLGKSFEFKT HDGSVIKTTD AGSYGWKISK KQAGKTLTNA
LVANKQTVNA KNDIYGKGYN QQGTGYNTTS NNGIGDTYAE VSLADQHAWF YKDGKCVLST
DIVSGTNDKG NETPKGVWYI MYQQTPSILR GLNDDGSKYA SKVQYWSPFT DSGCGFHDAS
WRHDWSKQAY LAKGGGSHGC INMHPDVAGQ AFHDLQKNEP VIIY