Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0018 |
Symbol | |
ID | 5189516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 18960 |
End bp | 20681 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640589813 |
Product | ABC transporter related |
Protein accession | YP_001270631 |
Protein GI | 148543261 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACAGAA ATAAATTTAG TTTTCGGAGT TTCTTTAGTT TAATAAATCA ATTACATCCG CGGTATATTA AGCTTTTTGT GGGAATCTTA CTAGGTTTTA TCTCCACGGG TGCTAACCTA TTTGTTCCTC AACTAGCGCA AAAGCTAATT AATAATTTTA AGAGTATTAG TCCAACGTTG GCGATTTTAA CAGTTGTAAT TTTTATAGCA GGATTAATTA CGAGTGCGTT ATCAGAGTTA TTATTAGGAA TTTTTGGTGA AAATGTTGTT TCTAAATTAC GGAAACAATT ATGGCAAAAA CTACTTAAAA TGCCTGTAAA ATATTTTGAT GATGTTAAAA CAGGTGAAAT CAGTTCACGA TTAGTTAATG ATACATCACA GGTGAAGGAT TTACTTGCTT CAACATTACC AAATGCAATG ACATCGCTTT TACAATTCGT TGGTGCACTG GTTATTATGT TAGCAATGGA TTGGCGGATG ACATTGTTGA TGTTTGTGGC AGTTCCTTTA GTGATTTTAG TCATGCTACC AGTGATGAAT CAGTCGCGTA AGATTGGTCG GGTTCGGCAA GATGAATTAG CAAAATTTGC TAGTGATTCC ACCGATGTAT TAGGTGAGGT CCGATTAGTT AAGTCTTCAA ACGGTGAAGA ACATGAACTG GCAAAGGGAA ATCGCCGCAT CGACAATTTA TATCATGTCG GAAGAAAAGA AGCGTTGATT AACTCAGTAA CGCAACCAAT TACAAACATG CTCATGATGA TAATGTTTCT TGGGATTCTT GGTTACGGAG CAATTCGTGT TATGAATGGT GCAATGACAA TGGGCGCCTT AGTTTCGTTT TTAATGTATC TTTTCCAGAT TATTAGTCCC GTTGTTGTAA TTAGTCAGCT CTTTAATAAT ATGGCAAAGA CTAGCGGAGC CACGGAACGT ATCCAACAAA TCTTAACTGA ACCAGAAGAA TTTGCTGCTG ATAAAGCAGA AAAAGATATT GCGAGCGCAC CATTGAAATT TGAGAATGTT GATTTTGCAT ATGAGGAAGG CAAGCCAGTC TTACGAGATG TTAGTTTTGA AACCAAACCC AATGCAGTGG TAGCTTTTGC CGGCCCATCT GGTGGAGGAA AGTCAACTAT TTTCTCATTG ATTGAACGAT TCTATCAGCC AACAGGTGGA AAAATTTTGA TCGGTGAAGA GAATATCGAA AATGTAGACT TAGCCAAGTG GCGTGAACAA ATTGGTCTCG TAAGTCAAGA TGCCGCGGTA ATGCCAGGAA CTATTCGTGA TAATTTAACT TATGGGTTAC GAAGAGAAGT CTCGGATGAG GAACTTTGGG ACGCGTTAAG AATGGCTTAT GCAGATGGTT TTGTCAGTGA AATGGAAGAT CAGTTAGAAA CTGAAATTGG TGAACGAGGG ATCAAACTTT CTGGAGGACA ACGGCAACGA ATAGCGATTG CGCGGGCTTT TCTCCGCGAT CCAAAAATCT TAATGCTTGA TGAAGCCACT GCTAGCTTGG ATGCTGAATC GGAGGCGATG GTTCAAAAAG CATTGGGAGA CTTAATGCAA GGAAGAACGA CACTAGTAAT TGCGCATCGC TTGAGTACGA TTGTCGATGC CGATAAAATC TACTTTATCG AAAATGGAAC AGTATCCGGT GCAGGAACCC ATCAAGAATT ATTAAAGACA ACACCACTAT ATGCACAGTA TGTTAAGGAT CAGTTTAAAT AA
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Protein sequence | MNRNKFSFRS FFSLINQLHP RYIKLFVGIL LGFISTGANL FVPQLAQKLI NNFKSISPTL AILTVVIFIA GLITSALSEL LLGIFGENVV SKLRKQLWQK LLKMPVKYFD DVKTGEISSR LVNDTSQVKD LLASTLPNAM TSLLQFVGAL VIMLAMDWRM TLLMFVAVPL VILVMLPVMN QSRKIGRVRQ DELAKFASDS TDVLGEVRLV KSSNGEEHEL AKGNRRIDNL YHVGRKEALI NSVTQPITNM LMMIMFLGIL GYGAIRVMNG AMTMGALVSF LMYLFQIISP VVVISQLFNN MAKTSGATER IQQILTEPEE FAADKAEKDI ASAPLKFENV DFAYEEGKPV LRDVSFETKP NAVVAFAGPS GGGKSTIFSL IERFYQPTGG KILIGEENIE NVDLAKWREQ IGLVSQDAAV MPGTIRDNLT YGLRREVSDE ELWDALRMAY ADGFVSEMED QLETEIGERG IKLSGGQRQR IAIARAFLRD PKILMLDEAT ASLDAESEAM VQKALGDLMQ GRTTLVIAHR LSTIVDADKI YFIENGTVSG AGTHQELLKT TPLYAQYVKD QFK
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