Gene Lreu_0005 details

Gene Information

• Locus tag: Lreu_0005
• ID: 5188813
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 4619
• End bp: 6568
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640589799
• Product: DNA gyrase subunit B
• Protein accession: YP_001270618
• Protein GI: 148543248
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCAACG AACAACAAAA AGAAACCAAG ATGGAATTGG CTAGCGAGTA TGATGCTAGT 
CAAATTCAGG TTTTAAAGGG ATTGGATGCA GTTCGAAAGC GTCCCGGAAT GTACATTGGT 
TCCACTTCAG CCCAGGGACT TCATCACCTT GTTTGGGAAA TTGTCGATAA CGGAATTGAC 
GAAGCCTTAG CAGGATTCTG TGATGAAATT AATGTTGTAG TTAATCCAGA TAACAGTATT 
ACTGTTAAGG ATAATGGTCG GGGAATTCCA GTTGATACAC AAAAAGAAAC CGGAAAGTCA 
GCCTTAGAAA CGGTCTTTAC TGTTCTGCAC GCCGGAGGAA AATTTGGTGG CGGCGGATAT 
AAGGTTTCTG GAGGTCTTCA CGGGGTAGGA GCTTCTGTTG TAAATGCCTT ATCCACTGAA 
TTGGATGTTA AAGTTGCTCG TCAAGGTAAA CGTTACTACA TGGATTTTGA TCATGGTCAT 
GTTAAGTCTG CAATGAAGGT AATTGAAGAG GGACTTCCAG AAACTGAGCA TGGTACAACC 
GTTCACTTTA AGCCGGATCC AGAAATTTTC CGTGAAACGA CAACTTATAA TATTAAAACT 
TTAACTGATC GTTTAAGAGA ATTAGCCTTC TTAAATAAGG GACTTAAAAT TACGATCGAA 
GACTTACGAC AAGCAGACCA TGAACGGAAA GAATTCCATT ATGAAGGTGG GATTCGTCAT 
TATGTTGAAT ACCTTAATGA AGATCAAAAT GTTTTATTTG ACCCACCGAT TTACGTGGAA 
GGTAAAGAAA ACGATATTAC TGTTGAAGTT TCCTTACAAT ATACAGATTC ATACCGCAGT 
AACTTGCTAA CTTTCACTAA CAATATTCAT ACTTACGAAG GTGGGACCCA TGAGACCGGA 
TTTAAGATGG CCCTTACACG TGTTATCAAT GATTACGGCC ACAAAGCAGG TATCTTAAAG 
TCAAATGAGA CCTTATCAGG GGATGACGTA CGGGAAGGTT TAACTGCGGT TGTCTCCATT 
AAGCACCCTG ATCCGCAATT CGAGGGACAG ACTAAGACTA AGTTAGGAAA CTCAGATGCA 
CGAACAGCGA CTGACCATGT CTTTGCGGCA ACATTTAACC GGTTCTTATT AGAACACCCA 
GACGAAGCGC GGCAAATTAT TGAAAAAGGT CAACTCGCTT CCAAAGCCCG GGTGGCTGCT 
AAACGTGCCC GGGAAGTTAC CCGTAAAAAG AGTGGTCTTG AAATTAGTAA TTTACCAGGT 
AAATTAGCAG ATAACACAAG TAAGGATCCG GAAATTTCAG AATTATTTAT TGTCGAGGGT 
GATTCTGCCG GTGGTTCAGC AAAGCAAGGA CGTTCGCGGC TCACCCAGGC AATTCTTCCA 
ATTCGCGGAA AGATCTTGAA TGTTGAAAAA GCAACTCTTG ATCGAGTTCT AGCTAATGAC 
GAAATTCGTT CTTTATTTAC CGCTCTTGGA ACAGGATTTG GTGATGACTT TGATATTACA 
AAGGCTAATT ACCATAAATT AATTATCATG ACTGATGCGG ATGTCGATGG TGCTCATATT 
CGGACATTAC TGTTAACCTT GTTCTACCGC TTTATGAAAC CAATGATTAC GCATGGGTAT 
GTTTATATTG CTCAGCCGCC GCTATATCAA GTTCGGCAAG GTAAATTTGT AAAATACATT 
GACTCTGATG AAGAACTAGA ACAGGTTGTA AGCTCACTAC AACCAAGTCC TAAGCCAGTT 
ATTCAGCGTT ACAAAGGGTT AGGTGAAATG GATGCTGAGC AATTATGGGA AACAACAATG 
GATCCAGAGA ATCGGCACCT ATTACGAGTA AAACTAGACG ACGCAGAACA GGCTGATAAG 
ATTTTCCCAA TGCTAATGGG AACCAAGGTC GGACCACGGC GCGACTTTAT TGAACAAAAT 
GCTAAGTTCG TTGAGAATCT TGACCTGTAA 

 

Protein sequence

MSNEQQKETK MELASEYDAS QIQVLKGLDA VRKRPGMYIG STSAQGLHHL VWEIVDNGID 
EALAGFCDEI NVVVNPDNSI TVKDNGRGIP VDTQKETGKS ALETVFTVLH AGGKFGGGGY 
KVSGGLHGVG ASVVNALSTE LDVKVARQGK RYYMDFDHGH VKSAMKVIEE GLPETEHGTT 
VHFKPDPEIF RETTTYNIKT LTDRLRELAF LNKGLKITIE DLRQADHERK EFHYEGGIRH 
YVEYLNEDQN VLFDPPIYVE GKENDITVEV SLQYTDSYRS NLLTFTNNIH TYEGGTHETG 
FKMALTRVIN DYGHKAGILK SNETLSGDDV REGLTAVVSI KHPDPQFEGQ TKTKLGNSDA 
RTATDHVFAA TFNRFLLEHP DEARQIIEKG QLASKARVAA KRAREVTRKK SGLEISNLPG 
KLADNTSKDP EISELFIVEG DSAGGSAKQG RSRLTQAILP IRGKILNVEK ATLDRVLAND 
EIRSLFTALG TGFGDDFDIT KANYHKLIIM TDADVDGAHI RTLLLTLFYR FMKPMITHGY 
VYIAQPPLYQ VRQGKFVKYI DSDEELEQVV SSLQPSPKPV IQRYKGLGEM DAEQLWETTM 
DPENRHLLRV KLDDAEQADK IFPMLMGTKV GPRRDFIEQN AKFVENLDL