Gene Pput_5310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5310 
Symbol 
ID5190980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5958963 
End bp5959208 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content56% 
IMG OID640589793 
Producthypothetical protein 
Protein accessionYP_001270612 
Protein GI148550510 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0328546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAC TGGCACTCGT TCCGATCCAG TTTTACCGTT ACGCCATTAG TCCTCTGATG 
GCCAATCACT GTCGGTTTTT CCCCAGTTGC TCCTGTTACG CGTATGAAGC CATCGAAAAC
CATGGCATCT GGCGTGGTGG GTGGCTGGCC GTTCGTCGCC TGGGGCGTTG TCATCCGTGG
AATGACGGCG GTTTCGACCC CGTTCCACCC GCTCCTTCCT CCCGAACTTC TTCGATAGCC
GAGTAA
 
Protein sequence
MRKLALVPIQ FYRYAISPLM ANHCRFFPSC SCYAYEAIEN HGIWRGGWLA VRRLGRCHPW 
NDGGFDPVPP APSSRTSSIA E