Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5306 |
Symbol | |
ID | 5190199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5953293 |
End bp | 5955185 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640589789 |
Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
Protein accession | YP_001270608 |
Protein GI | 148550506 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0508979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATTTCC CTTCCCGTTT TGACGTGATC GTCATCGGCG GCGGCCATGC CGGTACCGAG GCTGCGCTTG CGTCTGCACG CATGGGTGTG AAAACCCTGC TGCTGACCCA TAACGTGGAA ACCCTCGGTC ACATGAGCTG CAACCCCGCC ATCGGCGGTA TTGGCAAAAG CCATCTGGTC AAAGAGATCG ATGCGCTCGG CGGCGCCATG GCGCTGGCCA CCGACAAGAG CGGCATCCAG TTCCGCGTTC TGAACAACCG CAAGGGCCCG GCCGTACGAG CCACCCGTGC GCAAGCCGAC CGCGCCATCT ACAAGGCAGT GGTACGTGAA ATCCTGGAAA ACCAGCCAAA CCTGTGGATA TTCCAGCAGT CCTGCGATGA CCTGATCGTC GAGCAGGACC AGGTCAAAGG CGTGGTGACC CAGATGGGCC TGCGTTTCTT TGCCGAATCG GTGGTGCTGA CTACCGGTAC CTTCCTCGGC GGCCTTATCC ACATTGGTCT GCAAAACCAT TCCGGTGGTC GCGCCGGTGA TCCACCTTCG ATTGCCCTGG CCCACCGCAT GCGTGAACTG CCGCTGCGCG TCGGCCGCCT GAAAACCGGT ACCCCGCCAC GCATTGACGG CCGCTCGGTG GACTTCTCGG TAATGACCGA ACAGCCAGGC GATACGCCGA TCCCGGTGAT GTCGTTCATG GGCAATGCCG AAATGCACCC GCGTCAGGTG AGCTGCTGGA TTACCCACAC CAATGCGCGC ACCCACGAGA TCATTGCCTC GAACCTCGAC CGTTCACCGA TGTACTCGGG CGTGATCGAA GGTGTCGGTC CGCGCTACTG TCCGTCGATC GAAGACAAGA TCCACCGCTT CGCCGACAAG GAAAGCCACC AGGTGTTCAT TGAGCCGGAA GGCTTGAACA CCCATGAGTT GTATCCCAAC GGTATTTCCA CTTCGCTGCC GTTCGACGTG CAGTTGGAGC TGGTCCGTTC GATCCGCGGC ATGGAAAACG CCCACATCGT GCGCCCGGGC TATGCCATCG AGTACGACTA CTTCGATCCC CGTGACCTCA AGTACAGCCT CGAGACCAAA GTTATCGGCG GCCTGTTCTT CGCCGGGCAG ATCAACGGCA CCACCGGGTA CGAAGAAGCC GGCGCCCAGG GCCTGCTGGC CGGGACTAAC GCCGCACTTC GGGCGCAGGG CCGTGACAGC TGGTGCCCGC GCCGCGACGA GGCATACATC GGCGTACTGG TGGACGACCT GATTACCTTG GGTACCCAGG AGCCGTACCG CATGTTTACC TCGCGTGCCG AGTATCGGCT GATACTGCGC GAAGACAACG CCGACCTGCG CCTGACCGAA AAGGGCCGTG AACTGGGCCT GATCGATGAC CTGCGCTGGG CCGCGTTCTG CGCCAAGCGC GACGGTATCG AGCGTGAGGA ACAGCGCCTG AAATCGACCT GGGTTCGGCC GAATACCGAG CAAGGTCAGG CCGTTGTGGA TAAATTCGGC ACTCCGCTGA GCCACGAGTA CAGCTTGCTC AACCTGCTGG CGCGCCCCGA AATCGACTAC GCCGGCCTGA TCGAAGCGAC TGGCGGTGAA GCGATCGATC CACAGGTTGC CGAGCAGGTC GAGATCCGCA CCAAATACGC CGGCTACATC GACCGCCAGC AGGATGAAAT TGCCCGACTG CGCGCCAGCG AAGACACACG CCTGCCTGTG GATATCGACT ACACGACGAT TTCCGGCCTG TCCAAGGAGA TACAGGGCAA GCTGAGCCAG ACCCGTCCGG AGACGCTGGG CCAGGCTTCG CGTATCCCGG GTGTGACCCC GGCGGCGATT TCCCTGATGC TGATTCACTT GAAAAAACGC GGCGCTGGCC GCGAATTGGA GCAAAGCGCT TGA
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Protein sequence | MDFPSRFDVI VIGGGHAGTE AALASARMGV KTLLLTHNVE TLGHMSCNPA IGGIGKSHLV KEIDALGGAM ALATDKSGIQ FRVLNNRKGP AVRATRAQAD RAIYKAVVRE ILENQPNLWI FQQSCDDLIV EQDQVKGVVT QMGLRFFAES VVLTTGTFLG GLIHIGLQNH SGGRAGDPPS IALAHRMREL PLRVGRLKTG TPPRIDGRSV DFSVMTEQPG DTPIPVMSFM GNAEMHPRQV SCWITHTNAR THEIIASNLD RSPMYSGVIE GVGPRYCPSI EDKIHRFADK ESHQVFIEPE GLNTHELYPN GISTSLPFDV QLELVRSIRG MENAHIVRPG YAIEYDYFDP RDLKYSLETK VIGGLFFAGQ INGTTGYEEA GAQGLLAGTN AALRAQGRDS WCPRRDEAYI GVLVDDLITL GTQEPYRMFT SRAEYRLILR EDNADLRLTE KGRELGLIDD LRWAAFCAKR DGIEREEQRL KSTWVRPNTE QGQAVVDKFG TPLSHEYSLL NLLARPEIDY AGLIEATGGE AIDPQVAEQV EIRTKYAGYI DRQQDEIARL RASEDTRLPV DIDYTTISGL SKEIQGKLSQ TRPETLGQAS RIPGVTPAAI SLMLIHLKKR GAGRELEQSA
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