| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5306 |
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| Symbol | |
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| ID | 5190199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5953293 |
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| End bp | 5955185 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589789 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001270608 |
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| Protein GI | 148550506 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0508979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTTCC CTTCCCGTTT TGACGTGATC GTCATCGGCG GCGGCCATGC CGGTACCGAG
GCTGCGCTTG CGTCTGCACG CATGGGTGTG AAAACCCTGC TGCTGACCCA TAACGTGGAA
ACCCTCGGTC ACATGAGCTG CAACCCCGCC ATCGGCGGTA TTGGCAAAAG CCATCTGGTC
AAAGAGATCG ATGCGCTCGG CGGCGCCATG GCGCTGGCCA CCGACAAGAG CGGCATCCAG
TTCCGCGTTC TGAACAACCG CAAGGGCCCG GCCGTACGAG CCACCCGTGC GCAAGCCGAC
CGCGCCATCT ACAAGGCAGT GGTACGTGAA ATCCTGGAAA ACCAGCCAAA CCTGTGGATA
TTCCAGCAGT CCTGCGATGA CCTGATCGTC GAGCAGGACC AGGTCAAAGG CGTGGTGACC
CAGATGGGCC TGCGTTTCTT TGCCGAATCG GTGGTGCTGA CTACCGGTAC CTTCCTCGGC
GGCCTTATCC ACATTGGTCT GCAAAACCAT TCCGGTGGTC GCGCCGGTGA TCCACCTTCG
ATTGCCCTGG CCCACCGCAT GCGTGAACTG CCGCTGCGCG TCGGCCGCCT GAAAACCGGT
ACCCCGCCAC GCATTGACGG CCGCTCGGTG GACTTCTCGG TAATGACCGA ACAGCCAGGC
GATACGCCGA TCCCGGTGAT GTCGTTCATG GGCAATGCCG AAATGCACCC GCGTCAGGTG
AGCTGCTGGA TTACCCACAC CAATGCGCGC ACCCACGAGA TCATTGCCTC GAACCTCGAC
CGTTCACCGA TGTACTCGGG CGTGATCGAA GGTGTCGGTC CGCGCTACTG TCCGTCGATC
GAAGACAAGA TCCACCGCTT CGCCGACAAG GAAAGCCACC AGGTGTTCAT TGAGCCGGAA
GGCTTGAACA CCCATGAGTT GTATCCCAAC GGTATTTCCA CTTCGCTGCC GTTCGACGTG
CAGTTGGAGC TGGTCCGTTC GATCCGCGGC ATGGAAAACG CCCACATCGT GCGCCCGGGC
TATGCCATCG AGTACGACTA CTTCGATCCC CGTGACCTCA AGTACAGCCT CGAGACCAAA
GTTATCGGCG GCCTGTTCTT CGCCGGGCAG ATCAACGGCA CCACCGGGTA CGAAGAAGCC
GGCGCCCAGG GCCTGCTGGC CGGGACTAAC GCCGCACTTC GGGCGCAGGG CCGTGACAGC
TGGTGCCCGC GCCGCGACGA GGCATACATC GGCGTACTGG TGGACGACCT GATTACCTTG
GGTACCCAGG AGCCGTACCG CATGTTTACC TCGCGTGCCG AGTATCGGCT GATACTGCGC
GAAGACAACG CCGACCTGCG CCTGACCGAA AAGGGCCGTG AACTGGGCCT GATCGATGAC
CTGCGCTGGG CCGCGTTCTG CGCCAAGCGC GACGGTATCG AGCGTGAGGA ACAGCGCCTG
AAATCGACCT GGGTTCGGCC GAATACCGAG CAAGGTCAGG CCGTTGTGGA TAAATTCGGC
ACTCCGCTGA GCCACGAGTA CAGCTTGCTC AACCTGCTGG CGCGCCCCGA AATCGACTAC
GCCGGCCTGA TCGAAGCGAC TGGCGGTGAA GCGATCGATC CACAGGTTGC CGAGCAGGTC
GAGATCCGCA CCAAATACGC CGGCTACATC GACCGCCAGC AGGATGAAAT TGCCCGACTG
CGCGCCAGCG AAGACACACG CCTGCCTGTG GATATCGACT ACACGACGAT TTCCGGCCTG
TCCAAGGAGA TACAGGGCAA GCTGAGCCAG ACCCGTCCGG AGACGCTGGG CCAGGCTTCG
CGTATCCCGG GTGTGACCCC GGCGGCGATT TCCCTGATGC TGATTCACTT GAAAAAACGC
GGCGCTGGCC GCGAATTGGA GCAAAGCGCT TGA
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| Protein sequence | MDFPSRFDVI VIGGGHAGTE AALASARMGV KTLLLTHNVE TLGHMSCNPA IGGIGKSHLV
KEIDALGGAM ALATDKSGIQ FRVLNNRKGP AVRATRAQAD RAIYKAVVRE ILENQPNLWI
FQQSCDDLIV EQDQVKGVVT QMGLRFFAES VVLTTGTFLG GLIHIGLQNH SGGRAGDPPS
IALAHRMREL PLRVGRLKTG TPPRIDGRSV DFSVMTEQPG DTPIPVMSFM GNAEMHPRQV
SCWITHTNAR THEIIASNLD RSPMYSGVIE GVGPRYCPSI EDKIHRFADK ESHQVFIEPE
GLNTHELYPN GISTSLPFDV QLELVRSIRG MENAHIVRPG YAIEYDYFDP RDLKYSLETK
VIGGLFFAGQ INGTTGYEEA GAQGLLAGTN AALRAQGRDS WCPRRDEAYI GVLVDDLITL
GTQEPYRMFT SRAEYRLILR EDNADLRLTE KGRELGLIDD LRWAAFCAKR DGIEREEQRL
KSTWVRPNTE QGQAVVDKFG TPLSHEYSLL NLLARPEIDY AGLIEATGGE AIDPQVAEQV
EIRTKYAGYI DRQQDEIARL RASEDTRLPV DIDYTTISGL SKEIQGKLSQ TRPETLGQAS
RIPGVTPAAI SLMLIHLKKR GAGRELEQSA
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