Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5264 |
Symbol | |
ID | 5193768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5911918 |
End bp | 5912403 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640589747 |
Product | thioesterase superfamily protein |
Protein accession | YP_001270566 |
Protein GI | 148550464 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.62859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCTG GAAACGCCCA GCTGAGCATG ACCGTCCTGA TGACCCCGGA CATGGCCAAC TTTTCTGGCA ACGTACATGG CGGCACCCTG CTCAAGTACC TCGACGAAGT GGCTTATGCA TGCGCCAGCC GTTATGCCGG CAGTTATGTG GTGACCCTGT CGGTCGACCA GGTGATCTTC CGTGAACCCG TGCACGTGGG TGAACTGGTG ACCTTCCTGG CGTCGGTCAA CTACACCGGC AACACTTCGA TGGAAGTTGG CATCAAAGTC GTGACCGAGA ACATTCGCGA GCGCTCGGTG CGCCATTCCA ACAGCTGCTT CTTCACCATG GTCGCGGTCG ACGACAACCG CCGCCCGGTG CCGGTGCCAC CACGCCAGCC GCACAGCAGC GAAGAAAAGC GCCGCTTCCT GCAAGGCCAG CAGCGCCGGC AGATCCGCCA GGAACTGGAA AAGCGCTATC AGGACTTGAA AACCGACGCC ATTTAA
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Protein sequence | MEPGNAQLSM TVLMTPDMAN FSGNVHGGTL LKYLDEVAYA CASRYAGSYV VTLSVDQVIF REPVHVGELV TFLASVNYTG NTSMEVGIKV VTENIRERSV RHSNSCFFTM VAVDDNRRPV PVPPRQPHSS EEKRRFLQGQ QRRQIRQELE KRYQDLKTDA I
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