Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5263 |
Symbol | |
ID | 5190496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5909818 |
End bp | 5911578 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640589746 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001270565 |
Protein GI | 148550463 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.680967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCCA TCAGCTTCAT CCAGGACCTG GCAGTCATCA TGCTGGTCGC TGGCGTGGTC ACCATTCTTT TTCACCGTTT CAAGCAGCCG GTGGTGCTGG GCTACATTGT CGCCGGCTTC ATCATTGGCC CGCACACTCC GCCGTTCGGC CTGATTCATG ACGAAGACAC CATCAAGACC CTCGCCGAAC TGGGGGTGAT CTTCCTGATG TTCTGCCTGG GGCTCGAGTT CAGCTTGCGC AAGCTGTTCA AGGTCGGTGC CACGGCGTTC ATCGCAGCGT TCCTGGAAAT CGTCCTGATG ATCTGGATCG GTTTCGAGAT TGGCCGCTGG TTTGGCTGGA GCACCATGGA TTCACTGTTC CTGGGCGCCA TTCTGGCCAT TTCCTCCACC ACCATCATCG TCAAGGCGCT CAACGACTTG AAGATGAAGA ACGAGCGCTT TGCCCAGCTG ATCTTCGGCG TGCTGATCGT CGAGGACATT CTGGGTATCG GTATCATTGC CCTGCTGTCG GGCATCGCGG TCAGCGGCAC GGTCAGTTCG GGCGAAGTGT TCTCCACTGT CGGCAAGCTG TCGCTGTTCA TGATTGTCGC CTTGGTCATC GGTATTTTGC TGGTACCGCG GTTACTGGCC TATGTCGCCA AGTTCGAAAG CAACGAAATG TTGCTGATCA CTGTTCTGGG CCTGTGTTTC GGCTTCTGCC TGCTGGTTGT GAAGCTGGAG TACAGCATGG TGTTAGGCGC TTTCCTGATT GGCGCGATCA TGGCCGAATC ACGCCAGTTG CTGAAGATCG AACGCCTGAT CGAGCCTGTA CGCGACCTGT TCAGTGCCAT CTTCTTTGTC GCCATCGGCC TGATGATCGA CCCTCAGGTA CTGATCGACT ATGCCTGGCC TATCGTTGTC ATCACCCTGG CGGTGGTGCT GGGCAAAATG CTGTCTTGCG GCATGGGGGC GTTCATTGCC GGCAATGACG GGCGTACGTC TTTGCGTGTG GGCATGGGGC TTTCGCAGAT CGGCGAGTTC TCCTTCATCA TTGCCGCGCT GGGCATGACC CTGCAGGTGA CCAGCGACTT CCTTTACCCG GTGGCGGTGG CGGTATCGGC AATCACCACG TTGCTGACAC CCTATCTGAT CCGCGCGGCT GACCCGTTGT CGCAGAAACT GGGCAATGTG GTGCCCGCCC GCCTCGCACG CGTGTTGTCG TTGTATGGCG AGTGGTTACG CAACATCCAG CCGCAGGGCG AGAGTGCCAT GCTGGCGGCG ATGATCCGGC GTATCCTGTT GCAGGTTGGG GTGAACCTGG CGCTGGTGAT CGCCATCTTC TTCAGTGGCG GCTACTTTGC AGGGCGTATC GGCAATTGGC TCAGTGAGTG GGTCAGCGAT GTCAGCCAGC AGAAGGCCGT CATATGGGGG GCTGCTTTGT TGCTGTCACT GCCATTCCTG ATCGCTGCGT ACCGCAAGCT AAAGGCACTC TCGATGCTGC TGGCAGAGAT GGGCGTGAAG CCGGAAATGG CCGGGCGACA TACCCAGCGC GTGCGCCGTG TGATCGCCGA AGTGATCCCG CTGTTGTCGC TGCTGGTGAT TTTCCTGCTG TTGTCGGCAT TGTCCGCCAG CATTCTGCCC ACCAGCGAAT TGCTGCTGGT GATTGCCGTG GTAGCTGCGG TGGTGGTGGC GTTGTTGTGG CGCTGGTTTA TCCGCGTGCA CACGCGCATG CAGATCGCGT TGCTAGAGAC GCTGGAGAAC AGTCGCGAAA ACTCGCACTG A
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Protein sequence | MHAISFIQDL AVIMLVAGVV TILFHRFKQP VVLGYIVAGF IIGPHTPPFG LIHDEDTIKT LAELGVIFLM FCLGLEFSLR KLFKVGATAF IAAFLEIVLM IWIGFEIGRW FGWSTMDSLF LGAILAISST TIIVKALNDL KMKNERFAQL IFGVLIVEDI LGIGIIALLS GIAVSGTVSS GEVFSTVGKL SLFMIVALVI GILLVPRLLA YVAKFESNEM LLITVLGLCF GFCLLVVKLE YSMVLGAFLI GAIMAESRQL LKIERLIEPV RDLFSAIFFV AIGLMIDPQV LIDYAWPIVV ITLAVVLGKM LSCGMGAFIA GNDGRTSLRV GMGLSQIGEF SFIIAALGMT LQVTSDFLYP VAVAVSAITT LLTPYLIRAA DPLSQKLGNV VPARLARVLS LYGEWLRNIQ PQGESAMLAA MIRRILLQVG VNLALVIAIF FSGGYFAGRI GNWLSEWVSD VSQQKAVIWG AALLLSLPFL IAAYRKLKAL SMLLAEMGVK PEMAGRHTQR VRRVIAEVIP LLSLLVIFLL LSALSASILP TSELLLVIAV VAAVVVALLW RWFIRVHTRM QIALLETLEN SRENSH
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