| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5248 |
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| Symbol | |
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| ID | 5193167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5891562 |
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| End bp | 5892554 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589731 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001270550 |
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| Protein GI | 148550448 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.23442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.222302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACA GCCACCTGAC CACCCTCAAC GCAGTTTCGC TGATCCTCAA CGTCTTCCAG
GCAGACGGTT GCGAGGCGTC GGCGTTGCTG GCCGGCAGCG GCATTGGCCC GGCAGACCTG
GGGCATGCCG ATGCGCGCAT CACCACCCAG CAGGAGCTGC AGGTTTGCGC CAATGCTGTG
GCCCGGCGCG AGGACATTGG CCTGGAACTG GGCCAGCGCA TGCGTGTGTC GTGCTACGGC
ATGCTCGGTT ACGCGCTGCT CTCCAGTGCC ACTTTGGGTG ACGCCTTACG CCTGGCGCTG
CAGTATCCGG CACTGCTGGG AACAGTCTTC AAGCTGCGCT TGCTCGACGA CGGCCAACGT
GTCTGGTTCA GCGCCAGCGA TTACCAGGAC AGCCCGGCGC TGAGCGCTTT CAACGCCGAG
TTCTGTCTGG TGTCACTGAA AGTCATCTGT GACGACCTGC TTGGCCGGCC ATTGCCGCTG
CTTGGCGCAC GCTTCGAACA CCCTCGCCCT GGTTACCACG CGCTCTATGC CGAAGCGTTT
CAATGCCCGA TCGGTTTCGC CGCCGAGGAC AATGCCTTTG CCTTCGAACG GCGATGGCTG
GATATGCCGC TGCCGCTGGC CGACCCGATT ACTCACAAAG CCATGAGCGA GCGCTGCCGG
CGCCTGAACC TTGAATTCAC CGGTCGCCAG GCATGGCTGG GGCGGATTCG CCAGCTGTTG
GCGCAGCAAC TGGACGCAGC ACCTGGGCTG GAAGGGCTTG CGCGGCAGAT GAACTGCTCG
TCGCGCACCC TGCGCCGGCA TTTGCAGGCG CTGGGCAGCA GTTATCAACA GCTGCTGGAT
GAGCTGAGGT TCGAGCGGGC CAAGCAGTTG CTGGCCGATG AGCAGATGCC GATCTACCGG
ATTGCGGAGA CTTTGGGGTT CAGTGAGACG GCCAGTTTTC GGCATGCCTT CCAGCGCTGG
AGTGGCGTGG CGCCCAGCCA TTTTCGTGGT TGA
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| Protein sequence | MLHSHLTTLN AVSLILNVFQ ADGCEASALL AGSGIGPADL GHADARITTQ QELQVCANAV
ARREDIGLEL GQRMRVSCYG MLGYALLSSA TLGDALRLAL QYPALLGTVF KLRLLDDGQR
VWFSASDYQD SPALSAFNAE FCLVSLKVIC DDLLGRPLPL LGARFEHPRP GYHALYAEAF
QCPIGFAAED NAFAFERRWL DMPLPLADPI THKAMSERCR RLNLEFTGRQ AWLGRIRQLL
AQQLDAAPGL EGLARQMNCS SRTLRRHLQA LGSSYQQLLD ELRFERAKQL LADEQMPIYR
IAETLGFSET ASFRHAFQRW SGVAPSHFRG
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