| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5247 |
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| Symbol | aspA |
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| ID | 5190899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5889895 |
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| End bp | 5891331 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589730 |
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| Product | aspartate ammonia-lyase |
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| Protein accession | YP_001270549 |
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| Protein GI | 148550447 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0371805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.169068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATACA TCATGTCCTC TGCTGCATCG TTCCGCGTCG AAAAAGACTT GTTGGGTACC
CTTGAAGTTC CTGCAGATGC CTACTACGGC ATCCAGACCC TGCGCGCTGC CAACAACTTC
CACCTCTCCG GTGTTCCGCT GTCGCACTAC CCGAAGCTGG TCGTGGCCCT GGCCATGGTC
AAGCAGGCCG CTGCCGACGC CAACCGTGAG CTGGGTCACC TGAGCGATGC CAAGCATGCT
GCCATTTCCG CAGCCTGCGC CCGCCTGATC AAAGGCGATT TCCACGACCA GTTCGTGGTT
GACATGATCC AGGGCGGCGC TGGTACTTCT ACCAACATGA ACGCCAACGA AGTCATTGCG
AACGTTGCGC TGGAGGCCAT GGGCCACCAG AAGGGTGAGT ACAAGTACCT GCACCCTAAC
AACGACGTGA ACATGGCGCA GTCGACCAAC GACGCCTACC CGACCGCAAT CCGCCTGGGC
CTGTTGCTGG GTCACGACGC GCTGCTGGCC AGCCTTGATA GCCTGATCCA GGCCTTCGCT
GCCAAGGGTA AAGAATTCGA CCACGTACTG AAGATGGGCC GTACCCAACT GCAGGACGCC
GTACCGATGA CCCTGGGCCA GGAATTCCGC GCCTTCGCCA CCACCATGAC TGAAGACCTG
CAGCGCCTGC GCTCGCTGGC TCCGGAACTG CTGACCGAAA TCAACCTGGG CGGTACCGCC
ATCGGTACTG GCATCAACGC CGACCCTGGC TACCAGGCCT TGGCCGTACA GCGCCTGGCC
ACCATCAGCG GCCATCCGCT GGTACCCGCT GCCGACCTGA TCGAAGCCAC CTCCGACATG
GGCGCCTTTG TGCTGTTCTC CGGCATGCTC AAGCGCACCG CGGTCAAGCT GTCGAAGATC
TGCAACGACC TGCGCCTGCT GTCCAGCGGC CCGCGTACCG GCATCAATGA GATCAACCTG
CCAGCGCGTC AGCCAGGCAG CTCGATCATG CCAGGCAAGG TCAACCCGGT TATTCCAGAA
GCTGTGAACC AGGTGGCCTT CGCCATCATG GGCAACGACC TGGCCCTGAC CGTCGCCGCT
GAAGGTGGTC AGCTGCAGCT GAACGTGATG GAGCCGCTGA TCGCCTACAA GATCTTCGAC
TCGATCCGCC TGCTGCAACG CGCCATGGAC ATGCTGCGCG AGCACTGCAT CGTCGGCATC
ACCGCCAACG AACAGCGCTG CCGTGAACTG GTCGAGCACT CGATCGGCCT GGTTACCGCA
CTGAACCCGT ACATCGGCTA CGAGAACGCC ACCCGTATCG CCCGCGTTGC CCTGGAAAGC
GGCCGCGGCG TACTGGAACT GGTGCGCGAA GAGAAGCTGC TGGACGACGC GATGCTCGAC
GACATCCTGC GTCCGGAAAA CATGATCGCT CCACGTCTGG TTCCGCTGAA GGCGTAA
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| Protein sequence | MIYIMSSAAS FRVEKDLLGT LEVPADAYYG IQTLRAANNF HLSGVPLSHY PKLVVALAMV
KQAAADANRE LGHLSDAKHA AISAACARLI KGDFHDQFVV DMIQGGAGTS TNMNANEVIA
NVALEAMGHQ KGEYKYLHPN NDVNMAQSTN DAYPTAIRLG LLLGHDALLA SLDSLIQAFA
AKGKEFDHVL KMGRTQLQDA VPMTLGQEFR AFATTMTEDL QRLRSLAPEL LTEINLGGTA
IGTGINADPG YQALAVQRLA TISGHPLVPA ADLIEATSDM GAFVLFSGML KRTAVKLSKI
CNDLRLLSSG PRTGINEINL PARQPGSSIM PGKVNPVIPE AVNQVAFAIM GNDLALTVAA
EGGQLQLNVM EPLIAYKIFD SIRLLQRAMD MLREHCIVGI TANEQRCREL VEHSIGLVTA
LNPYIGYENA TRIARVALES GRGVLELVRE EKLLDDAMLD DILRPENMIA PRLVPLKA
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