| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5238 |
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| Symbol | |
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| ID | 5194996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5882260 |
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| End bp | 5883549 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589721 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001270540 |
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| Protein GI | 148550438 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.18052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.198846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG TGCCCAGCAG TATCGAGCAG CCCTCGCGGC CGCTGACCCG CAGCGACTAC
AAGACCCTCT CACTGTCCGC CCTGGGCGGC GCGCTGGAGT TCTACGATTT CATCATCTTC
GTGTTCTTCG CGACGGTGGT GGGCAAGTTG TTCTTCCCGG CCGACATGCC CGAGTGGCTG
CGGCTGATGC AAACGTTCGG CATCTTCGCC GCCGGCTACC TGGCGCGGCC GCTGGGCGGC
ATCATCATGG CCCACTTCGG CGACTTGCTC GGGCGCAAGA AGATGTTCAC CCTGAGCATC
TTCATGATGG CCCTGCCGAC CCTGATCATG GGCCTGCTGC CGACGTATGC GCAGATCGGT
ATGTGGGCAC CGATCCTGCT GTTGCTGATG CGTGTGATCC AGGGCGCGGC AATCGGCGGC
GAAGTACCGG GCGCATGGGT GTTCGTCTCT GAACACGTGC CGGCTCGCAA CACCGGCTAT
GCCTGCGGCA CCCTGACCGC CGGCCTGACT GCCGGCATTC TGCTGGGCTC GCTGGTAGCG
ACCTTGATCA ACAGCGTGTA CAGCGCGGAA GAAGTGGCTG ACTACGCCTG GCGTATCCCG
TTCCTGCTTG GCGGCGTGTT CGGCCTGTTC TCGGTGTATC TGCGCCGATG GCTGCACGAG
ACCCCGGTGT TCGCCGAAAT GCAGCAACGC AAGGCACTGG CCGAGGAGTT GCCTCTGCGC
GCCGTGCTGC GTGACCACCG TGGTCCGATC ATCCTGTCCA TGCTGCTGAC CTGGATGCTT
TCAGCCGGCA TCGTGGTGGT CATCCTGATG ACCCCGGCGC TGCTGCAGAG CTTCTACCAC
ATCAGCCCGA CCGACTCGCT CAAAGCCAAC AGCCTGGCCA TCGTGTTGCT CAGCTTTGGT
TGTATAGGTG CCGGCAGCCT GGCCGACCGC TTTGGTGCAG GCCGCGTGTT CGTGATCGGC
AGCCTGCTGC TGCTGGCCAG CTCCTGGACC TTCTACCACA GCCTGCCGAC CCGGCCCGAG
CTGCTGTTCC CGCTGTATGC CGTGACCGGC CTGTGCGTGG GTGTGATTGG CGCAGTGCCT
TATGTAATGG TCAAGGCGTT CCCGGCGGTG GTGCGTTTCA GCGGGTTGTC GTTCTCGTAC
AACGTGGCCT ACGCCATCTT TGGCGGGCTG ACGCCGATGG TGGTGACCGC ACTGCTGAAG
GTGAGCCCGA TGGCGCCTGC CTACTACGTG GCAGGCCTGT GCGCCGTCGG TCTGGCCGTG
GGCCTGTACC TGCTCGCCAA CAAGCGCTGA
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| Protein sequence | MTSVPSSIEQ PSRPLTRSDY KTLSLSALGG ALEFYDFIIF VFFATVVGKL FFPADMPEWL
RLMQTFGIFA AGYLARPLGG IIMAHFGDLL GRKKMFTLSI FMMALPTLIM GLLPTYAQIG
MWAPILLLLM RVIQGAAIGG EVPGAWVFVS EHVPARNTGY ACGTLTAGLT AGILLGSLVA
TLINSVYSAE EVADYAWRIP FLLGGVFGLF SVYLRRWLHE TPVFAEMQQR KALAEELPLR
AVLRDHRGPI ILSMLLTWML SAGIVVVILM TPALLQSFYH ISPTDSLKAN SLAIVLLSFG
CIGAGSLADR FGAGRVFVIG SLLLLASSWT FYHSLPTRPE LLFPLYAVTG LCVGVIGAVP
YVMVKAFPAV VRFSGLSFSY NVAYAIFGGL TPMVVTALLK VSPMAPAYYV AGLCAVGLAV
GLYLLANKR
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