| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5228 |
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| Symbol | |
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| ID | 5193243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5869361 |
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| End bp | 5870050 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589711 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001270530 |
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| Protein GI | 148550428 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.661336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.450139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAGGCA GGAACATTCT GATCGTCGAC GACGAAGCGC CCATTCGCGA GATGATCGCC
GTTGCCCTGG AAATGGCCGG CTATGACTGC CTGGAAGCGG AAAACTCCCA ACAGGCCCAC
GCGATCATCG TCGACCGCAA ACCGGACCTG ATCCTGCTCG ACTGGATGCT GCCGGGCACC
TCCGGCATCG AGCTGGCCCG CCGCCTGAAG CGCGACGAAC TGACCGGCGA TATCCCGATC
ATCATGCTCA CCGCCAAGGG TGAAGAGGAC AACAAGATCC AGGGCCTGGA AGTGGGCGCC
GACGACTACA TCACCAAGCC GTTCTCGCCG CGTGAACTGG TAGCGCGACT GAAAGCCGTG
CTGCGCCGCA CGGGTCCGAG CGACAGCGAG GCGCCGATCG AGGTCGGCGG CCTGCTGCTC
GACCCGATCA GCCACCGTGT GACCATCGAC GGCAAGCCGG CCGAGATGGG CCCTACCGAA
TACCGCCTGC TGCAGTTTTT CATGACCCAC CAGGAGCGCG CCTACACCCG AGGCCAATTG
CTGGACCAGG TGTGGGGCGG CAACGTCTAC GTCGAGGAAC GTACCGTCGA CGTGCACATC
CGTCGCCTGC GCAAGGCGCT GGGTGAAGCT TACGAGAATC TGGTACAAAC CGTCCGGGGC
ACTGGCTACC GCTTCTCGAC CAAGAGCTGA
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| Protein sequence | MVGRNILIVD DEAPIREMIA VALEMAGYDC LEAENSQQAH AIIVDRKPDL ILLDWMLPGT
SGIELARRLK RDELTGDIPI IMLTAKGEED NKIQGLEVGA DDYITKPFSP RELVARLKAV
LRRTGPSDSE APIEVGGLLL DPISHRVTID GKPAEMGPTE YRLLQFFMTH QERAYTRGQL
LDQVWGGNVY VEERTVDVHI RRLRKALGEA YENLVQTVRG TGYRFSTKS
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