Gene Pput_5227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5227 
Symbol 
ID5195182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5868817 
End bp5869188 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content57% 
IMG OID640589710 
Producthypothetical protein 
Protein accessionYP_001270529 
Protein GI148550427 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.423904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAC ATACGCTGAG CTGGATGGCC CTTTTCACTG CGTTGGCGCT CCCGGGGGTG 
GCGTTGGCCC ACCATGCCAT GGAGAAGGAT GGCAAGTGGG TCGATGAGGC CGGCATGACC
CTGTACACCT TTGACAAGGA TGCGGGTGGC AAGTCGATGT GCAATGGCGA GTGCGCCAAG
AACTGGCCAC CGTTGATGGT CAAGAAAGAA GACGAAGCAC CGAAGGATAA ATGGACCCAT
GTAGAGCGTG ACGACGGTTC GATGCAGTGG GCTTACGACG GCAAGCCGCT GTATACCTTC
ATCAAGGACA AGAAGGCCGG TGACATGACC GGTGACGGCA TGAAAGACGT CTGGCACGTT
GCCAAGCCTT GA
 
Protein sequence
MTRHTLSWMA LFTALALPGV ALAHHAMEKD GKWVDEAGMT LYTFDKDAGG KSMCNGECAK 
NWPPLMVKKE DEAPKDKWTH VERDDGSMQW AYDGKPLYTF IKDKKAGDMT GDGMKDVWHV
AKP