| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5218 |
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| Symbol | |
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| ID | 5190204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5860061 |
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| End bp | 5860987 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589701 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001270520 |
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| Protein GI | 148550418 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.327028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA CAGAATTACG CTACATCGTC ACACTCGCCC AGGAACAGCA CTTCGGCCAT
GCCGCCGAGC GCTGTCACGT GAGCCAACCC ACCCTGTCGG TCGGTGTGAA GAAGCTCGAG
GACGAGCTTG GCGTTCTGAT CTTCGAGCGC AGCAAAAGCG CAGTACGTCT GACCCCGGTC
GGCGAAAACA TCGTCGCCCA AGCGCAGAAG GTACTGGAGC AGGCCCAAGG CATTCGCGAG
CTGGCCCAGG CCGGCAAAAA TCAGCTGACC GCTCCGCTCA AGGTTGGCGC TATCTACACC
GTCGGCCCCT ACCTGTTCCC GCACCTGATC CCGCAGCTGC ACCGCGTAGC GCCGCAAATG
CCGCTGTACA TCGAAGAAAA CTTCACCCAC GTACTGCGCG AAAAGCTGCG CAACGGCGAA
CTGGACGCGG TGATCATCGC CCTGCCGTTC AACGAAGCCG ACGTGCTGAC GCTACCGCTA
TACGACGAAC CGTTCTGCGC CCTGATGCCT GCCGACCACC CATGGACGGC GAAGAAGACC
ATCGACACCG CCATGCTCAA CGACAAGAGC CTGCTGCTGC TTGGTGAGGG CCACTGCTTC
CGTGACCAGG TACTGGAAGC CTGCCCTACC CTGAACAAAG GGGGTGAAGG CTCAAGGCAC
ACCACGGTCG AGTCCAGCTC GCTGGAAACC ATCCGTCACA TGGTGGCTTC CGGCCTTGGC
GTATCGATCC TGCCGCTGTC GGCAGTGCAC AGCCATCACT ATGCCCCCGG CGTCATCGAA
GTGCGCCCGC TGACGGCACC GGCACCGTTC CGCACGGTCG CCATCGCCTG GCGCGCCAGC
TTCCCGCGGC CAAAGGCCAT CGAGATCCTC GCCGATTCGA TCCGCCTGTG CTCGGTCGCC
AAAAACCCTG CGGAACAACC GGCCTGA
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| Protein sequence | MTLTELRYIV TLAQEQHFGH AAERCHVSQP TLSVGVKKLE DELGVLIFER SKSAVRLTPV
GENIVAQAQK VLEQAQGIRE LAQAGKNQLT APLKVGAIYT VGPYLFPHLI PQLHRVAPQM
PLYIEENFTH VLREKLRNGE LDAVIIALPF NEADVLTLPL YDEPFCALMP ADHPWTAKKT
IDTAMLNDKS LLLLGEGHCF RDQVLEACPT LNKGGEGSRH TTVESSSLET IRHMVASGLG
VSILPLSAVH SHHYAPGVIE VRPLTAPAPF RTVAIAWRAS FPRPKAIEIL ADSIRLCSVA
KNPAEQPA
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