| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5210 |
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| Symbol | rpoZ |
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| ID | 5193910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5852992 |
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| End bp | 5853255 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640589693 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_001270512 |
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| Protein GI | 148550410 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.715758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.333342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGCG TAACTGTTGA AGACTGCCTG GAACACGTGG ATAACCGCTT TGAGCTGGTC
ATGCTCTCGA CCAAGCGCGC TCGCCAGCTG GCGACCGGCG GCAAAGAGCC ACGCGTTGCG
TGGGAAAACG ACAAGCCAAC CGTTGTTGCC CTGCGTGAAA TTGCCGAAGG CATCGTCACC
AACGAGTTCA TCGCCGCTGA AGAGATCGTC ACCGAGGATC CGGTGTTCGC CGCGTTCGAG
GACGAGAACA ACGAGGCTGT CTGA
|
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| Protein sequence | MARVTVEDCL EHVDNRFELV MLSTKRARQL ATGGKEPRVA WENDKPTVVA LREIAEGIVT
NEFIAAEEIV TEDPVFAAFE DENNEAV
|
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