Gene Pput_5203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5203 
Symbol 
ID5192831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5845832 
End bp5846695 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID640589686 
Producthypothetical protein 
Protein accessionYP_001270505 
Protein GI148550403 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.208712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCACA GCATGACCGC TTTTGCTCGT GTCGAGCGCG CCGGCAGCCA AGGCACCCTG 
GTCTGGGAGC TGCGTTCGGT CAACCACCGT TACCTGGAGC CGCACCTGCG CCTGCCCGAG
GCCCTGCGCG ACCTCGAAGG CGGTGTACGT GAAGGCCTGC GCCAGGGCCT GTCACGCGGC
AAGGTGGAAT GCACCTTGCG CCTCAACGAA GACAGTAATG GCAAACCGCT GAAAGTGGAC
CATGAGCGCG CCAAGCAACT GGTTGCCGCC GCCGAAGAAG TGGCGGGCCT GATCAAGCAG
CCTGCCCCCC TGAACCCGCT GGAAGTGCTG TCATGGCCAG GCGTGCTGGT GGCCGACACC
AGCGACCCAC AGGCACTGAA CGCCGAAGCC ATGGCGCTGT TCGACGAAGC GTTGGCCGAA
CTCAAGGCCG GGCGCCAGCG CGAAGGCCAG GAACTGGCGC GGCTGATCAA CGAACGCCTG
GACAACATGG CCAGCGAAGT CACGACCCTG CGCGCCCTGG TGCCGCAGAT GCTGGCGGCG
CAGCGGCAGA AGATTCTCGA CCGCTTCGGC GACATGCAAG CCGAGCTGGA CCCACAGCGC
CTGGAGCAAG AGATGGTACT GCTGGCCCAG AAAAGCGACG TGGCAGAGGA GCTCGACCGC
CTCAGCACCC ACGTCACCGA AGTGCGCCGC GTGCTCAAGG GTGGCGGCGC CGCTGGCCGG
CGCCTGGACT TCCTGATGCA GGAGCTCAAC CGCGAGGCCA ACACCCTTGG CTCCAAGGCC
TTCGACCCAC GCAGCACGCA AGCGGCGGTC AACCTGAAGG TACTGATCGA ACAGATGCGT
GAACAAGTAC AGAACATCGA GTAA
 
Protein sequence
MVHSMTAFAR VERAGSQGTL VWELRSVNHR YLEPHLRLPE ALRDLEGGVR EGLRQGLSRG 
KVECTLRLNE DSNGKPLKVD HERAKQLVAA AEEVAGLIKQ PAPLNPLEVL SWPGVLVADT
SDPQALNAEA MALFDEALAE LKAGRQREGQ ELARLINERL DNMASEVTTL RALVPQMLAA
QRQKILDRFG DMQAELDPQR LEQEMVLLAQ KSDVAEELDR LSTHVTEVRR VLKGGGAAGR
RLDFLMQELN REANTLGSKA FDPRSTQAAV NLKVLIEQMR EQVQNIE