Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5203 |
Symbol | |
ID | 5192831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5845832 |
End bp | 5846695 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589686 |
Product | hypothetical protein |
Protein accession | YP_001270505 |
Protein GI | 148550403 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.208712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCACA GCATGACCGC TTTTGCTCGT GTCGAGCGCG CCGGCAGCCA AGGCACCCTG GTCTGGGAGC TGCGTTCGGT CAACCACCGT TACCTGGAGC CGCACCTGCG CCTGCCCGAG GCCCTGCGCG ACCTCGAAGG CGGTGTACGT GAAGGCCTGC GCCAGGGCCT GTCACGCGGC AAGGTGGAAT GCACCTTGCG CCTCAACGAA GACAGTAATG GCAAACCGCT GAAAGTGGAC CATGAGCGCG CCAAGCAACT GGTTGCCGCC GCCGAAGAAG TGGCGGGCCT GATCAAGCAG CCTGCCCCCC TGAACCCGCT GGAAGTGCTG TCATGGCCAG GCGTGCTGGT GGCCGACACC AGCGACCCAC AGGCACTGAA CGCCGAAGCC ATGGCGCTGT TCGACGAAGC GTTGGCCGAA CTCAAGGCCG GGCGCCAGCG CGAAGGCCAG GAACTGGCGC GGCTGATCAA CGAACGCCTG GACAACATGG CCAGCGAAGT CACGACCCTG CGCGCCCTGG TGCCGCAGAT GCTGGCGGCG CAGCGGCAGA AGATTCTCGA CCGCTTCGGC GACATGCAAG CCGAGCTGGA CCCACAGCGC CTGGAGCAAG AGATGGTACT GCTGGCCCAG AAAAGCGACG TGGCAGAGGA GCTCGACCGC CTCAGCACCC ACGTCACCGA AGTGCGCCGC GTGCTCAAGG GTGGCGGCGC CGCTGGCCGG CGCCTGGACT TCCTGATGCA GGAGCTCAAC CGCGAGGCCA ACACCCTTGG CTCCAAGGCC TTCGACCCAC GCAGCACGCA AGCGGCGGTC AACCTGAAGG TACTGATCGA ACAGATGCGT GAACAAGTAC AGAACATCGA GTAA
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Protein sequence | MVHSMTAFAR VERAGSQGTL VWELRSVNHR YLEPHLRLPE ALRDLEGGVR EGLRQGLSRG KVECTLRLNE DSNGKPLKVD HERAKQLVAA AEEVAGLIKQ PAPLNPLEVL SWPGVLVADT SDPQALNAEA MALFDEALAE LKAGRQREGQ ELARLINERL DNMASEVTTL RALVPQMLAA QRQKILDRFG DMQAELDPQR LEQEMVLLAQ KSDVAEELDR LSTHVTEVRR VLKGGGAAGR RLDFLMQELN REANTLGSKA FDPRSTQAAV NLKVLIEQMR EQVQNIE
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