| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5202 |
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| Symbol | rph |
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| ID | 5192830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5844881 |
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| End bp | 5845603 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589685 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001270504 |
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| Protein GI | 148550402 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.883526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.399595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGTC CAAGTGGTCG CGTTGCCGAT CAGCTCCGCT CGATCCGCAT CACCCGCAAC
TACACCAAGC ACGCCGAAGG GTCGGTACTG GTCGAGTTCG GTGACACCAA AGTCATCTGC
ACGGTCAGCG TTGAAAACGG TGTACCGCGC TTCCTCAAAG GCCAGGGCCA AGGCTGGCTG
ACCGCCGAGT ATGGCATGCT GCCGCGCTCC ACCGGCGAAC GTAACCAGCG TGAGGCCAGC
CGTGGCAAGC AGGGTGGCCG CACCCTGGAA ATCCAGCGCC TGATCGGCCG TTCGCTGCGC
GCCGCGCTGG ACATGAGCAA GCTCGGTGAC ATCACCCTGT ACGTCGATTG CGACGTGATC
CAGGCCGATG GCGGTACCCG TACCGCGTCC ATCACCGGCG CCATGGTTGC CTTGTGCGAC
GCTTTGGCAG TGATCAAGAA GCGCGGCGGC CTCAAGGGCG GCAACCCGCT CAAGCACATG
ATCGCTGCCG TGTCGGTAGG CATGTACCAG GGCGAAGCCG TGCTTGATCT GGACTACCTG
GAAGACTCCG CAGCCGAAAC CGACCTGAAT GTGGTCATGA CCAGCGCTGG TGGCTTCATC
GAAGTGCAGG GTACTGCCGA AGGCGCACCG TTCCAGCCGG AAGATTTCAA CGCCATGCTC
GCTCTGGCGC AGAAGGGCAT GAACGAGATT TTCGAGCTGC AGCAGGCAGC ACTGGCTGAC
TGA
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| Protein sequence | MKRPSGRVAD QLRSIRITRN YTKHAEGSVL VEFGDTKVIC TVSVENGVPR FLKGQGQGWL
TAEYGMLPRS TGERNQREAS RGKQGGRTLE IQRLIGRSLR AALDMSKLGD ITLYVDCDVI
QADGGTRTAS ITGAMVALCD ALAVIKKRGG LKGGNPLKHM IAAVSVGMYQ GEAVLDLDYL
EDSAAETDLN VVMTSAGGFI EVQGTAEGAP FQPEDFNAML ALAQKGMNEI FELQQAALAD
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