| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5194 |
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| Symbol | radC |
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| ID | 5194753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5837867 |
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| End bp | 5838574 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589677 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001270496 |
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| Protein GI | 148550394 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0102732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.30357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGCA GCAAAGGCAG GGGTGGAATG AACATCAGGG AGTGGCCGGC GGAAGAACGG
CCTAGGGAGA AGTTGTTGCA GCGAGGGGCA GGGAGCCTGA CAGATACGGA GCTGCTGGCC
GTTTTTCTCG GCTCAGGTGT ACGTGGGCGT AATGTCGTGG AGCTTTCGCG AGGCTTGTTG
GTGAAGTTCG GCAGCTTGCG CCGGTTGCTG GAGGCCGACC GCGAGGCCTT CGTCGGCGAG
CTTGGGTTGG GCCCGGTGAG GTACAGCCAG CTGCAGGCAC TGCTTGAGAT CGGCCGCAGG
CACCTTGCAA CGTCGATTGA GCGCGAGTCT GCCATGGACA GCCCGGCAGC GGTGCGACGC
TACCTGAAAG CCATGCTCAG GCATGAGGCC AGCGAGGTGT TCGGGTGTCT GTTTCTCGAT
ACCAAGCACC GGCCACTGGC ATTCGAGATC CTGTTCAGGG GCACGATAGA TCGGGCGAGT
GTCTATCCGC GAGAGGTGGT GCGGCGGGCG TTGGTGCACA ACGCTGCGGC ATTGATCCTG
TGCCACAACC ATCCTTCAGG AATCAGTGAA CCGAGTCAGG ACGATGTGCA TTTGACCCTG
TCGTTGAAGC GGGGGCTGGC GTTGATTGAT GTGCGGGTGC TGGATCACAT CATCATTGGT
GATGGGGAGC CGTTGTCGAT GGTCGAGCAT GGGTGGATTG TGGCCTGA
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| Protein sequence | MGRSKGRGGM NIREWPAEER PREKLLQRGA GSLTDTELLA VFLGSGVRGR NVVELSRGLL
VKFGSLRRLL EADREAFVGE LGLGPVRYSQ LQALLEIGRR HLATSIERES AMDSPAAVRR
YLKAMLRHEA SEVFGCLFLD TKHRPLAFEI LFRGTIDRAS VYPREVVRRA LVHNAAALIL
CHNHPSGISE PSQDDVHLTL SLKRGLALID VRVLDHIIIG DGEPLSMVEH GWIVA
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