Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5192 |
Symbol | rpmB |
ID | 5195567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5835545 |
End bp | 5835781 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640589675 |
Product | 50S ribosomal protein L28 |
Protein accession | YP_001270494 |
Protein GI | 148550392 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.244386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.27276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGAG TCTGTCAAGT TACTGGTAAG GGTCCAGTAA CCGGGAACAA CATTTCCCAC GCAAACAACA AAACCCGTCG TCGTTTCCTG CCGAACCTGC AGCACCACCG TTTCTGGGTT GAATCCGAGA AGCGTTTCGT GCGTCTGCGC GTTTCCGCCA AAGGCATGCG TATCATCGAC AAGCGCGGCA TCGACGCCGT TCTGGTTGAC ATCCGTAAAG CTGGCGCCAA GGTTTAA
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Protein sequence | MSRVCQVTGK GPVTGNNISH ANNKTRRRFL PNLQHHRFWV ESEKRFVRLR VSAKGMRIID KRGIDAVLVD IRKAGAKV
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