| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5155 |
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| Symbol | |
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| ID | 5190210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5791633 |
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| End bp | 5792679 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589638 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001270457 |
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| Protein GI | 148550355 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.976904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG TATTCAGCTT CTGGCCGCTA CCTGCGGCCG GCATTCAAGG CGACAGAGGC
ATGCAGGAAA AACCCGCCCA CCGCACCGTG GCCATGGTGC TGTTCAACGA TGTGCTACTG
CTGGATGTCA CCGGCCCCAT GGATGCATTC GCCATCGCCA ACCGGTTCTT GCCTGAAGCA
CGGCAATATC GGCTGCTGAC CTTGGCCGAG GGGCAAGCAG TGGTGCGCGG CTCATGCGGC
CTGAAGGTGG TGGCAGACCA GCGCCTGGAG GACTTGCCGG AGGCCGTCGA CCTGTTGCTG
GTGCCGGGCG GCCCAGGGGC CTATGACACC GCCCTGCCAG GGATTGAGCG CTGGCTGCCC
AAGGCCGCAC GCCAGGCGAA GCGCTTCGGC GCCATCTGTA CCGGGGTGTT CCTGCTGGGG
CGGGCCGGGT TACTGAATGG CTATCGCTGC ACCACCCACT GGAATTACGT GGAGCGCCTG
GCACAGGCGT TTCCCGAAGC CAAGGTGGAG ACCGAGCAGA TCTACGTGAT GGACCGCTGC
CTGATCACCT CGGGCGGTAT CACTGCAGGG ATAGACCTGG CACTGGCGGT GGTCGCCGAG
GACCATGGCA AGGCGCTGGC CCTGGAAGTG GCCAAGGTAC TGCTGGTTGC CCGCCACCGT
CAGGGCGGGC AGACACCCTA CGGGCCGTTG CTGGCTGCGG TACCACGCGA TGACTCGCCG
ATTGCCCGGG TACAGGCCTA TATCGTCGAC CACATCGAGC AGGCGTTCAC CGTGCAGAAA
ATGGCCGAAC TGGTGGCCAT GAGCGGGCGC AACTTTGCCC GGACGTTTCA GCGTGAGGTG
GGCATTACGC CGCTGCAGTA CCTGCAGAAT GCGCGCATCG ATCGTGCGCG CAAGCTGCTC
GAATGCGGTG ACCTGCCGAT GAAGGTGGTG GCGGCGCAGT GCGGGTTTGG CAGTGACCGA
CACATGCGCA AGGTATTCTT TGAGCGAATT GGCATGACGC CGGCGCAGTA TCGGGCACAG
TTTGGTGGCG GTGAACAGTC GGATTAG
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| Protein sequence | MRFVFSFWPL PAAGIQGDRG MQEKPAHRTV AMVLFNDVLL LDVTGPMDAF AIANRFLPEA
RQYRLLTLAE GQAVVRGSCG LKVVADQRLE DLPEAVDLLL VPGGPGAYDT ALPGIERWLP
KAARQAKRFG AICTGVFLLG RAGLLNGYRC TTHWNYVERL AQAFPEAKVE TEQIYVMDRC
LITSGGITAG IDLALAVVAE DHGKALALEV AKVLLVARHR QGGQTPYGPL LAAVPRDDSP
IARVQAYIVD HIEQAFTVQK MAELVAMSGR NFARTFQREV GITPLQYLQN ARIDRARKLL
ECGDLPMKVV AAQCGFGSDR HMRKVFFERI GMTPAQYRAQ FGGGEQSD
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