Gene Pput_5120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5120 
Symbol 
ID5193823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5752711 
End bp5753361 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID640589603 
ProductChaC family protein 
Protein accessionYP_001270422 
Protein GI148550320 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAC TTGAAAGTAT GTCTTGGGAA GTTTCATACC CTCCGGCACT TGATTTCGGT 
CAGCAACATA CTCGCGAACA GTTGTTCAGC TCCATGAAAA CAACCATGTC CAGGCATCAG
GGTGGGCCGG TGTGGCTGTT TGCCTATGGT TCGTTGATCT GGCGCCCGGA GTGCAATTCG
GTGGAGCGCC AGCGCGCGCG GGTACATGGT TATCACCGTG GCTTGTACCT GTGGTCGCAT
GAACATCGCG GTACCCCGGA AACGCCCGGG CTGGTGTTTG GCCTGGACCG CGGTGGCTCC
TGCAGCGGCT TTGCCTACCG TCTGGATGAA CGCAACCTGG ACGACTCACT GATGGCCCTG
TGGCAACGCG AGATGCCCTA TCCGGCATAC CGGCCGCACT GGCTCAACTG CCGCCTGGGC
GATGGTAGCA AGGTGCAGGC CTTGGGCTTT GTACTGGAGC GGCATCTGCC GTGCTATGCC
GGTAACTTGC CGGATACGTT GCTCAGCCAG ATCCTGGCCA GTGCCAAGGG GCGGTATGGC
ACCACGCGTG ACTATGTCGA GCAGACCTTG AATGCACTGC GCAGTCACCA GATGCCCGAT
CGCAACCTGG AAGCGCGATT CAGGCGTTGC CACAATCTGC GCGAAGTGTG A
 
Protein sequence
MSALESMSWE VSYPPALDFG QQHTREQLFS SMKTTMSRHQ GGPVWLFAYG SLIWRPECNS 
VERQRARVHG YHRGLYLWSH EHRGTPETPG LVFGLDRGGS CSGFAYRLDE RNLDDSLMAL
WQREMPYPAY RPHWLNCRLG DGSKVQALGF VLERHLPCYA GNLPDTLLSQ ILASAKGRYG
TTRDYVEQTL NALRSHQMPD RNLEARFRRC HNLREV