Gene Pput_5110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5110 
Symbol 
ID5193805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5743291 
End bp5743611 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content60% 
IMG OID640589593 
Producthypothetical protein 
Protein accessionYP_001270412 
Protein GI148550310 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.30685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAA GCAATAGCGT CACCGTGCAG ATCCTCGACA AGGAATACTC GATCATCTGC 
CCGCCGGAAG AGCGCAACAA CCTGGTCAGC GCTGCGCGCT ACCTGGACGG CAAGATGCGC
GAGATCCGCA GCAGCGGCAA GGTGATCGGT GCCGACCGCA TCGCGGTGAT GGCGGCGTTG
AACATTACCC ACGAAATGCT GCACCGCCAG GAAGACCGCA ACGATGCGCC GGTCAGCGGC
ACAAACCGCG AACAGGTGCG CGACCTGCTG GATCGGGTAG ATAAGGCTTT GTCCGACGAC
ACGGATACCA AAATCGGCTG A
 
Protein sequence
MSSSNSVTVQ ILDKEYSIIC PPEERNNLVS AARYLDGKMR EIRSSGKVIG ADRIAVMAAL 
NITHEMLHRQ EDRNDAPVSG TNREQVRDLL DRVDKALSDD TDTKIG