| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5104 |
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| Symbol | |
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| ID | 5190683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5738118 |
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| End bp | 5739341 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589587 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | YP_001270406 |
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| Protein GI | 148550304 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.447652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGC GCGCAGATCT GTTGATTGTG GGTGCCGGTA TGGTCGGCAG CGCCCTGGCC
TTGGCGTTGC GCCACAGTGG CCTGCAAATT TTGTTGCTCG ACGGTGGCCC GCTGACGGTC
GTACCTTTCG ATGCCCAGGC CCCGTTCGAG CCGCGTGTCA GCGCGCTATC GGCGGCCAGC
CAGCGCATCC TCGAGCGCCT TGGCGCTTGG GACGGCATTG CCCAGCGACG CGCCACGCCG
TATTCCGACA TGCATGTGTG GGATGGCAGC GGCACCGGTC AGATTCACTT CTCGGCGGCC
AGTGTGCATG CCCAGGTGCT CGGCCATATC GTCGAGAACC GGGTGGTGCA GGACGGCCTG
CTGGAGCGCC TGCACGACAG CGACATCGGC CTGCTGGCCA ATGCGCGGCT GGAGCAATTA
CGCCGCTCTG GCGATGAGTG GCTGCTGACG CTGGCCGATG GCCGGCAACT GCGGGCACCG
TTGGTGATCG CTGCCGACGG TGCCAATTCG GCGGTGCGGC GTCTGGCCGG CTGCGAAACC
CGCGAGTGGG ATTACCTGCA CCATGCCATT GTCACCAGCG TGCGTTGCAG CGCCGGGCAC
CAGGCCACGG CCTGGCAGCG CTTCACTGAC GAAGGGCCAT TGGCCTTTTT GCCCTTGAGC
CGCGATGGCC AGCAAGACTG GTGCTCAATC GTATGGTCGA CCACTCCGGA GCATGCCGAG
CAGCTGATGG CGATGGATGA AGCGGCCTTC CTGCAAGCCC TCGGGCGTGC CTTCGAGGGC
CGCCTGGGCG ACGTGTTGCA GGCCGACCCA AGGGTATGCG TGCCGCTGCG TCAGCGCCAC
GCCAAGCGCT ATGTGGGTGA AGGCCTGGCA TTGATTGGCG ATGCCGCGCA CACCATCCAC
CCGCTGGCCG GGCAGGGTGT GAACCTCGGC TTCCTCGACG CGGCGGTGCT GGCCGAGGTG
CTGGTCAATG CTTGCGAGCG CGGCGAGAGA CTGGCCGATG TGAAGGTGCT GAGCCGTTAC
GAGCGCCGGC GCATGCCACA CAACCTGGCG TTGATGGCGG CGATGGAGGG CTTCGAGAGG
TTGTTCCAGG CCGATCCGCT GCCGTTGCGC TGGTTGCGCA ACAGCGGGTT GAAACTGGTG
GAGCAGATGC CGGAGGCCAA GGCGCTGTTT GTGCGCCAGG CGTTGGGTTT GAGTGGTGAC
CTGCCAGATC TGGCCAAGGC TTGA
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| Protein sequence | MDMRADLLIV GAGMVGSALA LALRHSGLQI LLLDGGPLTV VPFDAQAPFE PRVSALSAAS
QRILERLGAW DGIAQRRATP YSDMHVWDGS GTGQIHFSAA SVHAQVLGHI VENRVVQDGL
LERLHDSDIG LLANARLEQL RRSGDEWLLT LADGRQLRAP LVIAADGANS AVRRLAGCET
REWDYLHHAI VTSVRCSAGH QATAWQRFTD EGPLAFLPLS RDGQQDWCSI VWSTTPEHAE
QLMAMDEAAF LQALGRAFEG RLGDVLQADP RVCVPLRQRH AKRYVGEGLA LIGDAAHTIH
PLAGQGVNLG FLDAAVLAEV LVNACERGER LADVKVLSRY ERRRMPHNLA LMAAMEGFER
LFQADPLPLR WLRNSGLKLV EQMPEAKALF VRQALGLSGD LPDLAKA
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