| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5100 |
|---|
| Symbol | |
|---|
| ID | 5195495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5733503 |
|---|
| End bp | 5733886 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640589583 |
|---|
| Product | glycine cleavage system protein H |
|---|
| Protein accession | YP_001270402 |
|---|
| Protein GI | 148550300 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.831636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA TCCCCGCCGA CCTGCGTTTT GCCGAAAGCC ATGAGTGGGC TCGCCTGGAA
GCCGACGGCA GTGTGACCGT GGGTATCAGC GATCACGCCC AGCAAGCCTT GGGTGATGTG
GTGTTCGTCG AGCTGGCTGA AGTCGGCAAA GTGTTTGGCG CTGGCGACGC TGCGGGTGTG
GTGGAGTCGG TCAAGGCCGC TTCGGACATC TATGCCCCGG TCGGTGGCGA AGTGATTGCG
GTCAACGAAG AGCTGGCCGA TAGCCCGGAA CTGCTCAACG AAGAGCCTTA CGATTCGTGG
ATCTTCAAAT TGAAGCCAAG CAACCCGGCC GAGCTGGACA ACTTGCTGGA TGCGGCTGGC
TACAAGGCCC TGATTGGCGA GTAA
|
|---|
| Protein sequence | MSNIPADLRF AESHEWARLE ADGSVTVGIS DHAQQALGDV VFVELAEVGK VFGAGDAAGV
VESVKAASDI YAPVGGEVIA VNEELADSPE LLNEEPYDSW IFKLKPSNPA ELDNLLDAAG
YKALIGE
|
|---|
| |