| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5087 |
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| Symbol | |
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| ID | 5190670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5715675 |
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| End bp | 5716769 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640589570 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001270389 |
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| Protein GI | 148550287 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.940444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.403458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTATTT CTGTATTCCG CAAGGCCTTG ATGGCCAGCG CGGGCCTGAC GCTGGCGTGC
AGCGTCCAAG CGGCGCCGAC GGTGCACTTC TATAACTGGT CCGACTACAT CGGCCCGACT
ACACTCGCGG ACTTCGAGAA AGCTACGGGC ATCAAGCCCG TGCAAGACGT GTTCGACTCC
AACGAAACCC TGGAAGGCAA GCTGCTGGCC GGTAACACCG GCTATGACGT GGTGGTGCCG
TCCAACCATT TCCTGGGCAA GCAGATCAAG GCGGGCGCCT TCCAGAAGCT CGACAAGAAC
CTGCTGCCCA ACTATTCCAA CCTCGACCCG GCGTTGATGA AGCGCCTGGA AAAGAACGAC
CCGGGCAACC AGTACGCGGT GCCTTACCTG TGGGGCACCA ACGGCATCGG TTACAACGTC
GACAAGGTCA AGGCCGCGCT GGGCGTGGAT ACCATCGATT CCTGGGCCGT GCTGTTCGAG
CCCGAAAACA TGAAGAAGCT CTCCAAGTGC GGTGTGGCCT TCCTCGACTC GGCAGACGAA
ATGCTGCCAG CGGTGCTCAA CTACATGGGC CTCAACCCCA ACAGCACCGA CCCCAAGGAT
TACGTCAAGG CCGAGCAGAA GCTGCTGGCG GTGCGCCCGT ACGTGACCTA CTTCCACTCG
TCCAAGTACA TCACCGACCT GGCCAACGGC GACATCTGCG TCGCGGCAGG TTTTTCGGGT
GATGTGTTCC AGGCCAAGGC CCGCGCTGAA GAAGCGAAGA AGGGCGTGAA CCTGGCCTAC
GCCATTCCCA AGGAAGGCGG CAACCTCTGG TTCGACGTGC TGGCGATCCC CAAGGACGCC
AAGAACGTCA AAGAGGCGCA TGCCTTCATC AACTATTTGC TGAAACCTGA GGTTATCGCC
CAGGTCAGTG ATTACGTCGG TTACGCCAAC CCGAACCCCA AGGCTGGCGC CCTGATGGAC
CAGGCCGTAA GGACTGACGC CGCGGTTTAC CCACCGCAGG AAGTGCTGGA CAAGATGTTC
GTGAACTCAG AGTTGCCACC CAAGGTGCAA CGGCTGATGA CCCGCAGCTG GACCAAGGTC
AAGTCGGGCA AGTAA
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| Protein sequence | MSISVFRKAL MASAGLTLAC SVQAAPTVHF YNWSDYIGPT TLADFEKATG IKPVQDVFDS
NETLEGKLLA GNTGYDVVVP SNHFLGKQIK AGAFQKLDKN LLPNYSNLDP ALMKRLEKND
PGNQYAVPYL WGTNGIGYNV DKVKAALGVD TIDSWAVLFE PENMKKLSKC GVAFLDSADE
MLPAVLNYMG LNPNSTDPKD YVKAEQKLLA VRPYVTYFHS SKYITDLANG DICVAAGFSG
DVFQAKARAE EAKKGVNLAY AIPKEGGNLW FDVLAIPKDA KNVKEAHAFI NYLLKPEVIA
QVSDYVGYAN PNPKAGALMD QAVRTDAAVY PPQEVLDKMF VNSELPPKVQ RLMTRSWTKV
KSGK
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