Gene Pput_5083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5083 
Symbol 
ID5190817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5712093 
End bp5712548 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content57% 
IMG OID640589566 
Producthypothetical protein 
Protein accessionYP_001270385 
Protein GI148550283 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.268045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.309651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTAG CCGAATCCCA CCGACTGCGC CGCGGGCGCT TCTCCGAGCC TGGCAGGCTC 
TACATGCTGA CCACCATCAC GCATCAACGC AAACCACTGT TCCGCGACTT CCACCATGCC
CGTCTGGTGG TCAAACACCT TCGGGTCTCA GATGACATTC AGGACTGCCA ATCGTTGGCC
TGGGTAGTGA TGCCGGACCA TCTGCATTGG CTGATCGAGC TGAAAGAAGT GACATTGGGA
ACGCTGATGC GCAAGTTCAA ATCACGCACA GCGATTGCCT TGCGCAAGGC CGGTGTCGGG
CACAAGCCGA TATGGCAATC GGGTTACCAG GACCATGCGC TGCGGCGGGA AGAGTGTGTG
GTTCATGTAG CCCGGTACAT TGTTGCCAAT CCCTTGAGGG CTGGATTGGT CAGAAGTATC
AGGGACTATC CACATTGGGA TGCGGTATGG CTTTGA
 
Protein sequence
MPLAESHRLR RGRFSEPGRL YMLTTITHQR KPLFRDFHHA RLVVKHLRVS DDIQDCQSLA 
WVVMPDHLHW LIELKEVTLG TLMRKFKSRT AIALRKAGVG HKPIWQSGYQ DHALRREECV
VHVARYIVAN PLRAGLVRSI RDYPHWDAVW L