Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5083 |
Symbol | |
ID | 5190817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5712093 |
End bp | 5712548 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640589566 |
Product | hypothetical protein |
Protein accession | YP_001270385 |
Protein GI | 148550283 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.268045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.309651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTAG CCGAATCCCA CCGACTGCGC CGCGGGCGCT TCTCCGAGCC TGGCAGGCTC TACATGCTGA CCACCATCAC GCATCAACGC AAACCACTGT TCCGCGACTT CCACCATGCC CGTCTGGTGG TCAAACACCT TCGGGTCTCA GATGACATTC AGGACTGCCA ATCGTTGGCC TGGGTAGTGA TGCCGGACCA TCTGCATTGG CTGATCGAGC TGAAAGAAGT GACATTGGGA ACGCTGATGC GCAAGTTCAA ATCACGCACA GCGATTGCCT TGCGCAAGGC CGGTGTCGGG CACAAGCCGA TATGGCAATC GGGTTACCAG GACCATGCGC TGCGGCGGGA AGAGTGTGTG GTTCATGTAG CCCGGTACAT TGTTGCCAAT CCCTTGAGGG CTGGATTGGT CAGAAGTATC AGGGACTATC CACATTGGGA TGCGGTATGG CTTTGA
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Protein sequence | MPLAESHRLR RGRFSEPGRL YMLTTITHQR KPLFRDFHHA RLVVKHLRVS DDIQDCQSLA WVVMPDHLHW LIELKEVTLG TLMRKFKSRT AIALRKAGVG HKPIWQSGYQ DHALRREECV VHVARYIVAN PLRAGLVRSI RDYPHWDAVW L
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