| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5070 |
|---|
| Symbol | |
|---|
| ID | 5193274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5696407 |
|---|
| End bp | 5696973 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640589553 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_001270372 |
|---|
| Protein GI | 148550270 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.826071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTCA GCGAAAAACA CAAAATGCTC ACCGGCCAGC TCTACCACGC TGGCTGCCCT
GAACTGCAGG CCGAGCAGAT CGCCAACAAA CACTGGATGC ACCGCTACAA CAACAGTGTC
GAACTGCTCA ACGACGCACG CCACGGGCTG CTTGTGGAGC ACTTTGGCCA GGTTGGCGAA
GGCGCGGTGA TTCGCCCGCC GTTCTATTGC GATTACGGCT ACAACATCAG CGTTGGCCGT
AATACTTTCA TGAACTTCAA CTGCGTGATC CTCGACGTGG TGCCGGTGCG TATCGGCGAC
GACTGTCAGA TCGGCCCCAA CGTGCAGATC TACACCGCCG ACCATCCGCT CGATCCTGAA
GTGCGGCGCA GCGGGCTGGA GAGTGGGCGG ACGGTGACCA TCGGCGACAA CGTGTGGATC
GGCGGTGCGG CGATCATCCT GCCGGGGGTG ACCATCGGTG ATAACGCTAT CGTCGGCGCC
GGCAGTGTGG TGACCCGGGA TGTGCCCGCG GGCGCGACGG TGGTGGGTAA CCCGGCGAGG
GTCCGTCAGC CCGACCAAGG GCAGTAG
|
|---|
| Protein sequence | MSLSEKHKML TGQLYHAGCP ELQAEQIANK HWMHRYNNSV ELLNDARHGL LVEHFGQVGE
GAVIRPPFYC DYGYNISVGR NTFMNFNCVI LDVVPVRIGD DCQIGPNVQI YTADHPLDPE
VRRSGLESGR TVTIGDNVWI GGAAIILPGV TIGDNAIVGA GSVVTRDVPA GATVVGNPAR
VRQPDQGQ
|
|---|
| |