| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5011 |
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| Symbol | |
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| ID | 5192364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5633881 |
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| End bp | 5634750 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589496 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001270315 |
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| Protein GI | 148550213 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.967403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGTT CCGAGCTGAA GGCCTTCTAC ATGGTGGCCC GTCTGGGCAG CATCACCCAG
GCGGCGAAGA AGCTTGGCCT CAGCCAGCCC ACGGTGACCA CGCAGATCCG CAGCCTGGAA
GGCCAGTACG CCGTGGAGTT GTTCTACCGC GGCGGGCGGC GCCTGGTGTT GAGCGAGGAG
GGCTTACGCC TGCTGCCGAT GGTCAAGGCG CTGCTGCAGC AGGAAGCCGA CATCGAGTTC
GAGCTGCGCA ACAGTGGTCA GGCCCAGGGC AGCCTGCGCA TTGCGGCCAC TGCGCCTTAC
TACATTCTCG ACCTGGTCAA GATCTATCGC GAACGCTTAC CGCAGGTTGA AGTGGCGGTG
GAGATCGGCA ACTCGCAGCA GGTGCTGGAA ATGCTCGAGG ATTACCGGGT GGATATTGCC
GCGTCGTCGC AATGGGTGGA GGACGCGCGG TTGGTGCGGC GGATACTGGG CACTGACCCT
TTGGTGGTGG CGGTGCACCG CAACCACCCT CTGGCCCAAC GCCAGACGGT GTCGATCGAG
GTGGTGTCGG GGCATTGCCT GCTGATGCGC GAGAAGGGCT CGACCACACG CAAGCTGACC
GAGCAGATGA TGCAGGAGGC CGGGGTCAAG GCCGGCGCCC TGATGGAAAT CGGCAGCCGC
GAGTCGATTC GCGAAGCGGT GCTGCGCAAT ATCGGCATCA GCGTGATTGC CCGCCATGAG
GTGCCGCACA ACCCCGAACT CCGGGTGCTG GCGCTGGAGA ATGCGCCGGT GATGCACGAG
TACCTGTATT GCCTGAAGGA ACGGCGCCAG GCCCGGTTGC CAGCGGCATT CCTGGGGGTG
GCGCAGGAAG TGGCCGGTTC GCAGTTCTAG
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| Protein sequence | MLSSELKAFY MVARLGSITQ AAKKLGLSQP TVTTQIRSLE GQYAVELFYR GGRRLVLSEE
GLRLLPMVKA LLQQEADIEF ELRNSGQAQG SLRIAATAPY YILDLVKIYR ERLPQVEVAV
EIGNSQQVLE MLEDYRVDIA ASSQWVEDAR LVRRILGTDP LVVAVHRNHP LAQRQTVSIE
VVSGHCLLMR EKGSTTRKLT EQMMQEAGVK AGALMEIGSR ESIREAVLRN IGISVIARHE
VPHNPELRVL ALENAPVMHE YLYCLKERRQ ARLPAAFLGV AQEVAGSQF
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