| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4996 |
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| Symbol | |
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| ID | 5192493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5615317 |
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| End bp | 5616915 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589481 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001270300 |
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| Protein GI | 148550198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTCC CCGACCCGTT TCGCCAAGGC CTCGAACGCG GCTGGATCAC CCACGACGCC
TCGCGCCTGG AGCACGACCT GTTTCTGGAG GCCGACATTG CCGTGATCGG CAGTGGTGCC
GGCGGCGCCA CCAGCGCGCA GATGCTCAGC GCTGCCGGTT TCAAGGTACT GCTGATCGAA
GAAGGCCCCC TGAAAACCAG TAGCGATTTC CACCTGCTGG AGAGTGAAGC CTACGCAAGC
CTGTACCAGG AAGGCCTGGG ACGCATGAGC AAGGATGGCG CCATTACCAT CCTGCAGGGC
CGCGCCGTGG GTGGCACCAC GCTGGTGAAC TGGACCTCAA GCTTTCGTAC CCCGCCGCAA
ACCCTGGCGC ACTGGGCGTC GGTCCATGGT GTGAACGGTT TGGGCGAGGA TGAACTGCGC
CCCTGGTTCG AGCGCATGGA GCAGGAACTG GGCATCAGCC CTTGGGCCTT GCCGCCGAAT
GCCAACAACG AGGTGCTGCG CCGGGGCTGC GAACAGCTGG GTTACCGCTG GGGGGTGATC
CCGCGCAATG TGCGCGGCTG CTGGAACCTG GGCTACTGCG GCATGGGCTG CCCGGTGAAT
GCCAAACAAT CGATGCTGGT GACCCGTATA CCTGCCACCC TCGAGCAAGG CGGCGAACTG
CTGTACCTGG CGCGGGCCGA GCGCTTCACC CACAACGGCG AACGCATTCA GAGCCTGACA
TGCCAGGCCC TGGACGCCCA GGGCATACAC CCTACTGGCC GGCAGGTCAG CGTGCGGGCA
CGTCATTACC TCCTGGCCGG TGGCGGTATC AACAGCCCGG CCCTGCTGCT GCGCTCTGCC
GCGCCCGACC CGCATGGTCG CCTGGGCAAG CGAACCTTCC TGCACCTGGT CAACTTCAGT
GCGGCACGCT TCAGCGAGCG TATCGACCCC TACCATGGCG CCCCGCAATC GATCTACAGC
GATCACTTTC AGTGGCAAGG CGGCGTAGAC GGCCCGGCTG GCTACAAGCT GGAAGTACCG
CCGCTGCATC CGGCCCTGGC CAGCACCCTG CTGGGCGGGC ACGGCCACGA GAGTGCCCAG
CGCATGGCCG AGCTGCCCCA TACCCATGTG ATGCTGGCGC TGCTACGCGA TGGTTTTCAC
CCCGAAAGCC AGGGCGGGGC CGTGGAACTG CGCGGCGATG GTTCACCCGT GCTCGATTAC
CCGGTCACCG ACTACCTGCG GGATGGCTTG CGGCGCGCCT ACCGCAGCAT GGCGCACATA
CAGTTCGCCG CTGGCGCCAC CCAGGTAACC CCAGTGCACA GCGACGCCAG CGCCGCCTCT
CGCCTGGAAC AGGCCCTGAC CATGATCGAC AAACTGCGCC TGGAGCCCTT CCGCACGCGC
TTGGGCAGTG CCCATGTGAT GGGCGGCTGC GCCCTCGGCG AAGATCCGCG TCAGGCGGTG
TGCGACAGCC TGGGGCGCCA TCACCAGCTG GAAAACCTGT CGATTCACGA CGGCTCGCTG
TTCCCCACCA GCATCGGCGC CAACCCGCAA TTATCGGTGT ATGCCATCAG CGCCAGGCTC
AGCGAAGCAC TGGTCAGCCG CCTGGCACAC AGCGCATGA
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| Protein sequence | MPVPDPFRQG LERGWITHDA SRLEHDLFLE ADIAVIGSGA GGATSAQMLS AAGFKVLLIE
EGPLKTSSDF HLLESEAYAS LYQEGLGRMS KDGAITILQG RAVGGTTLVN WTSSFRTPPQ
TLAHWASVHG VNGLGEDELR PWFERMEQEL GISPWALPPN ANNEVLRRGC EQLGYRWGVI
PRNVRGCWNL GYCGMGCPVN AKQSMLVTRI PATLEQGGEL LYLARAERFT HNGERIQSLT
CQALDAQGIH PTGRQVSVRA RHYLLAGGGI NSPALLLRSA APDPHGRLGK RTFLHLVNFS
AARFSERIDP YHGAPQSIYS DHFQWQGGVD GPAGYKLEVP PLHPALASTL LGGHGHESAQ
RMAELPHTHV MLALLRDGFH PESQGGAVEL RGDGSPVLDY PVTDYLRDGL RRAYRSMAHI
QFAAGATQVT PVHSDASAAS RLEQALTMID KLRLEPFRTR LGSAHVMGGC ALGEDPRQAV
CDSLGRHHQL ENLSIHDGSL FPTSIGANPQ LSVYAISARL SEALVSRLAH SA
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