Gene Pput_4979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4979 
Symbol 
ID5191559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5597160 
End bp5597531 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content64% 
IMG OID640589464 
Producthypothetical protein 
Protein accessionYP_001270283 
Protein GI148550181 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCA GCTTCCTGAT GCTTGCCGCC TTTTTTGGCT TTACCGGTGT CGCCCTGGGC 
GCCTTCGCCG CTCATGGCCT GAAAAACCGG CTGACGGCTG ACTACCTGGC AATCTTCCAT
ACCGGCGTGA CTTACCAACT GGTCCATGCC TTGGCGATCT TCGGCGTTGC GGTGCTCTCG
GCGCACCTGC CCGGGCGCCT GGTCGGGTGG GCTGGCGGCC TGTTTGCGTT GGGCATCGTG
CTGTTCTCCG GCAGCCTGTA CCTCCTGACC CTCAGTGGCC TTGGCAAGCT TGGCATCATC
ACCCCGATTG GTGGCTTGTG CTTCCTTGTC GGCTGGCTGT GCCTGGGCCT GGCAGCCTGG
CGGCTGGGCT GA
 
Protein sequence
MLRSFLMLAA FFGFTGVALG AFAAHGLKNR LTADYLAIFH TGVTYQLVHA LAIFGVAVLS 
AHLPGRLVGW AGGLFALGIV LFSGSLYLLT LSGLGKLGII TPIGGLCFLV GWLCLGLAAW
RLG