| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4974 |
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| Symbol | |
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| ID | 5190252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5593538 |
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| End bp | 5594713 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589459 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001270278 |
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| Protein GI | 148550176 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA TGCTGTCGCC CCCCGGCGCG GCAGGCTTTA GCAGCCTGCC GCCGCTGGCG
CTGTACATCC ACATTCCGTG GTGCGTACGC AAATGCCCTT ATTGCGACTT CAACTCCCAC
GCAGCCGGGC CTGAACTACC GGAAGATGCC TACGTCACAG CCCTGCTCGA CGACCTCGAC
CAGGAACTGG CTGCCGTACA AGGTCGCCCG ATCAGCTCGA TCTTCTTCGG TGGCGGTACG
CCAAGCCTGT TCAGTGCCAA CGCCCTTGGC CGGCTACTGC GTGGCATAGA GCAACGTATT
CCGTTCGCGC CAGACATCGA GATCACCCTC GAAGCCAACC CGGGCACCTT CGAGCAGGAC
AAGTTCAAGG CCTACCGGCA GACCGGTATC AACCGTCTTT CGATCGGCGT GCAGAGCTTC
CAGCCAGCCA AGCTGGAGGC ACTGGGGCGC ATCCATAATG GCGACGAAGC GGTGCGGGCC
GCCGACATGG CGCGCGCGGC CGGTTTCGAC AATTTCAACA TGGACCTGAT GCACGGCCTG
CCCGACCAGT CGCTGGACGA CGCGCTGGGT GACCTGCGCC AGGCCATCGA TCTGGGGCCG
ACACACCTGT CGTGGTATCA GCTGACCGTG GAGCCGAACA CGGTGTTCTG GAACCAGCCG
CCAGAGCTGC CCGAAGACGA CATCCTCTGG GATATTCAGG AAGCCGGCCA AGCGCTGATG
GCCGAGCACG GCTACCGCCA GTACGAGGTA TCGGCCTACG CCCAGGCAGG CCGCGCCGCC
CGCCACAACC TCAACTACTG GCGCTTCGGT GACTTCATCG GCATTGGCGC TGGCGCTCAC
GGCAAGCTCA CCTTTGCCGA CGGGCGCATC CTGCGTACCT GGAAGACCCG CCTGCCCAAG
GATTACCTGA ACCTGGCCAA GCCGTTCAAG GCCGGCGAGA AGCTGCTGCC AGTCGATGAA
CTGCCGTTCG AGTTCCTGAT GAACGCCCTG CGCCTGACCG ATGGCGTGGA AGCCGAACTG
TTCACCCAAC GCACCGGCTT GCCACTGTCA CAGCTGCAGG AAGCACGCCC TGCCGCCGAA
CAAAAGGGCC TTTTGCAGGT CGAACCGGAT CGACTGGTAG CCACGCCGAG GGGCCAGTTG
TTCCTCAATG ACCTGCTGCA GTATTTCTTG ACCTAA
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| Protein sequence | MIEMLSPPGA AGFSSLPPLA LYIHIPWCVR KCPYCDFNSH AAGPELPEDA YVTALLDDLD
QELAAVQGRP ISSIFFGGGT PSLFSANALG RLLRGIEQRI PFAPDIEITL EANPGTFEQD
KFKAYRQTGI NRLSIGVQSF QPAKLEALGR IHNGDEAVRA ADMARAAGFD NFNMDLMHGL
PDQSLDDALG DLRQAIDLGP THLSWYQLTV EPNTVFWNQP PELPEDDILW DIQEAGQALM
AEHGYRQYEV SAYAQAGRAA RHNLNYWRFG DFIGIGAGAH GKLTFADGRI LRTWKTRLPK
DYLNLAKPFK AGEKLLPVDE LPFEFLMNAL RLTDGVEAEL FTQRTGLPLS QLQEARPAAE
QKGLLQVEPD RLVATPRGQL FLNDLLQYFL T
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